| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1469 |
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| Symbol | |
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| ID | 5083930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 1500991 |
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| End bp | 1501734 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640483025 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001167668 |
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| Protein GI | 146277509 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.750079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.690842 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTCAG GCCGGCTGAC CGGAAAGCGC GCGCTGGTGA CGGCGGCGGG TCAGGGGATC
GGCAGGGCCT CGGCTCTCGC CATGGCGCGC GAAGGGGCGC GGGTGCTGGC GACCGATGTG
AACGCGGCCG CGCTCGAGAG CCTCGCCGCC GAGGGGCTGG AGGTGCGCCG TCTGGACGTG
CGCGATCCGG CCTCGATCGC CGATGCCGTC GAGGCGGCAG GGCCGCTCGA CGTGCTCTTC
AATTGCGCGG GATTCGTCGC CTCCGGCACG ATCCTCGACT GCGACGAGGA GAGCTGGGAG
GTCTCGGTCG GGCTGAACCT GACGGGCATC TACCGCATGT GCCGCGCCTT CCTGCCCGGC
ATGATCGCGG GCGGCGGCGG GTCGATCGTC AACATGGCCT CGGTCGTCTC GGCGGCCATC
GCCGCGCCGA ACCGCTTCGT CTATGGCACC ACCAAGGCGG GCGTCGTGGG GCTGACCAAA
TCCATCGCGG CCGACTTCAT CGGGCAGGGC ATCCGCTGCA ACGCGATCTG CCCCGGCACG
GTCGAGAGCC CCTCGCTCGA AGAGCGGCTC CGCGCGACCG GCGACTACGA GGCCGCGCGG
CGCGCCTTCG TGGCGCGCCA GCCCATCGGC CGCATCGGCC GCCCCGAGGA GATCGCGGCG
CTCGTCGTCT ATCTCGCCTC GGACGAATCC GCCTACACCA CCGGGGTCGC CCATGTCATC
GACGGGGGCT GGTCCAATAT CTGA
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| Protein sequence | MGSGRLTGKR ALVTAAGQGI GRASALAMAR EGARVLATDV NAAALESLAA EGLEVRRLDV
RDPASIADAV EAAGPLDVLF NCAGFVASGT ILDCDEESWE VSVGLNLTGI YRMCRAFLPG
MIAGGGGSIV NMASVVSAAI AAPNRFVYGT TKAGVVGLTK SIAADFIGQG IRCNAICPGT
VESPSLEERL RATGDYEAAR RAFVARQPIG RIGRPEEIAA LVVYLASDES AYTTGVAHVI
DGGWSNI
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