Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1264 |
Symbol | |
ID | 3833572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 1485291 |
End bp | 1486073 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637825354 |
Product | Short-chain dehydrogenase/reductase SDR |
Protein accession | YP_426352 |
Protein GI | 83592600 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGTTC AGGGACTGCT GCGTGACAAG GTCGCGCTGG TGACGGGGGG GGCCAACGGC ATCGGCCGCG CCGCCGCCCG CGCTCTGTAC GGGGCGGGAG CCCGGGTGGT GATCGCCGAC CTCGACCAGA TGGCGGCGGA ACGCGCCGCC GAGGCCATGG GCGGCGATGT GCTGGGCCTG CCCGTCGATG TTCGCGATCG CACATCGATG CAAACCTGTG TCGACCGTGC CATCGCCTCG TGCGGCGGCA TCGACATCCT GGTGGCCAAT GCCGGGGTGT CGTCGATGCG CAAGGCGGTC GAGCTGACCG ACGAGGACTG GGCCTTCAAT TTCGATGTCA ACGCCAAGGG GGTTTTCCTC GCCAACCAAC TGGTCGTCCG CCATTTCCTG GCGACGGGGC GCAAGGGGGT GATCGTCAAC ACCGCCTCGC TGGCCGCCAA GGTCGGCGCC CCCCTGCTGG CCCATTACGC CGCCAGCAAA TTCGCCGTGC TCGGCTGGAC CCAGTCGCTG GCCCGCGAGC TGGCGCCCGA GGGCATCCGC GTCAACGCCG TCTGCCCGGG CTTCGTGCGC ACGCCCATGC AAGACCGTGA AATCATCTGG GAAGGCGAAT TGCGCGGCAT GACGCCCGAG GATGTTCGCA AGGAATACGT CGCCCTGACC CCGCTCGGCC GGATCGAGGA GCCCGAGGAT GTGGCCGATG TCATCTTGTT CCTCGCCTCG GATCTGTCGC GCTTCATGAC CGGCCAGGGC ATCAATGTGA CCGGTGGAAT CAAAATGGAT TAA
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Protein sequence | MGVQGLLRDK VALVTGGANG IGRAAARALY GAGARVVIAD LDQMAAERAA EAMGGDVLGL PVDVRDRTSM QTCVDRAIAS CGGIDILVAN AGVSSMRKAV ELTDEDWAFN FDVNAKGVFL ANQLVVRHFL ATGRKGVIVN TASLAAKVGA PLLAHYAASK FAVLGWTQSL ARELAPEGIR VNAVCPGFVR TPMQDREIIW EGELRGMTPE DVRKEYVALT PLGRIEEPED VADVILFLAS DLSRFMTGQG INVTGGIKMD
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