More than 300 homologs were found in PanDaTox collection
for query gene Bcenmc03_4431 on replicon NC_010515
Organism: Burkholderia cenocepacia MC0-3



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010515  Bcenmc03_4431  short-chain dehydrogenase/reductase SDR  100 
 
 
256 aa  514  1.0000000000000001e-145  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.523417  normal 
 
 
-
 
NC_010552  BamMC406_3420  short-chain dehydrogenase/reductase SDR  99.22 
 
 
256 aa  509  1e-143  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0826034  normal 
 
 
-
 
NC_008061  Bcen_4894  short-chain dehydrogenase/reductase SDR  98.05 
 
 
256 aa  504  9.999999999999999e-143  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_3269  short-chain dehydrogenase/reductase SDR  98.05 
 
 
256 aa  504  9.999999999999999e-143  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.210768 
 
 
-
 
NC_008545  Bcen2424_6913  short-chain dehydrogenase/reductase SDR  98.05 
 
 
256 aa  504  9.999999999999999e-143  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_4263  oxidoreductase, short chain dehydrogenase/reductase family  80.56 
 
 
257 aa  415  9.999999999999999e-116  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_1384  short-chain dehydrogenase/reductase SDR  59.84 
 
 
257 aa  319  1.9999999999999998e-86  Acidovorax sp. JS42  Bacteria  normal  0.981738  normal 
 
 
-
 
NC_008392  Bamb_6448  short-chain dehydrogenase/reductase SDR  57.09 
 
 
257 aa  310  2e-83  Burkholderia ambifaria AMMD  Bacteria  normal  0.429705  normal 
 
 
-
 
NC_010557  BamMC406_6155  short-chain dehydrogenase/reductase SDR  57.09 
 
 
257 aa  310  2e-83  Burkholderia ambifaria MC40-6  Bacteria  normal  0.30491  normal 
 
 
-
 
NC_008545  Bcen2424_6863  short-chain dehydrogenase/reductase SDR  57.2 
 
 
261 aa  285  5.999999999999999e-76  Burkholderia cenocepacia HI2424  Bacteria  normal  0.224503  n/a   
 
 
-
 
NC_008390  Bamb_1982  short-chain dehydrogenase/reductase SDR  52.33 
 
 
264 aa  275  5e-73  Burkholderia ambifaria AMMD  Bacteria  normal  0.473895  n/a   
 
 
-
 
NC_008345  Sfri_3600  short-chain dehydrogenase/reductase SDR  51.76 
 
 
255 aa  268  7e-71  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.000312486  n/a   
 
 
-
 
NC_009052  Sbal_3480  short-chain dehydrogenase/reductase SDR  52.59 
 
 
260 aa  258  7e-68  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_1496  short-chain dehydrogenase/reductase SDR  52.03 
 
 
255 aa  258  7e-68  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_0882  short-chain dehydrogenase/reductase SDR  52.19 
 
 
260 aa  255  4e-67  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_0894  short-chain dehydrogenase/reductase SDR  52.59 
 
 
260 aa  255  5e-67  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0859  short-chain dehydrogenase/reductase SDR  51.79 
 
 
260 aa  254  7e-67  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_0824  short chain dehydrogenase/reductase family oxidoreductase  50.58 
 
 
255 aa  251  8.000000000000001e-66  Colwellia psychrerythraea 34H  Bacteria  normal  0.394944  n/a   
 
 
-
 
NC_009784  VIBHAR_07016  oxidoreductase  49.6 
 
 
256 aa  246  3e-64  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013132  Cpin_5965  short-chain dehydrogenase/reductase SDR  50.2 
 
 
250 aa  245  4e-64  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.443482  normal 
 
 
-
 
NC_009831  Ssed_1363  short chain dehydrogenase/reductase family oxidoreductase  48.03 
 
 
263 aa  235  7e-61  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3846  short-chain dehydrogenase/reductase SDR  45.56 
 
 
254 aa  226  2e-58  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_006369  lpl2070  hypothetical protein  46.99 
 
 
254 aa  214  1.9999999999999998e-54  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_006368  lpp2080  hypothetical protein  46.18 
 
 
254 aa  210  1e-53  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_011887  Mnod_7850  short-chain dehydrogenase/reductase SDR  41.47 
 
 
256 aa  194  8.000000000000001e-49  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_0908  3-oxoacyl-(acyl-carrier-protein) reductase  41.09 
 
 
257 aa  188  5.999999999999999e-47  Pseudomonas aeruginosa PA7  Bacteria  normal  0.117831  n/a   
 
 
-
 
NC_011369  Rleg2_0680  short-chain dehydrogenase/reductase SDR  40.39 
 
 
255 aa  178  7e-44  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0185948  normal 
 
 
-
 
NC_011726  PCC8801_1575  short chain dehydrogenase  36.86 
 
 
249 aa  143  2e-33  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009952  Dshi_1258  short-chain dehydrogenase/reductase SDR  37.6 
 
 
247 aa  140  3e-32  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.203668  normal 
 
 
-
 
NC_008752  Aave_1089  short-chain dehydrogenase/reductase SDR  37.69 
 
 
259 aa  139  4.999999999999999e-32  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0332234  normal 
 
 
-
 
NC_009832  Spro_4682  short-chain dehydrogenase/reductase SDR  32.54 
 
 
253 aa  137  1e-31  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_010085  Nmar_0026  short-chain dehydrogenase/reductase SDR  36 
 
 
269 aa  137  2e-31  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_011884  Cyan7425_4436  short-chain dehydrogenase/reductase SDR  34.6 
 
 
265 aa  136  4e-31  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013162  Coch_1303  short-chain dehydrogenase/reductase SDR  32.43 
 
 
258 aa  134  9.999999999999999e-31  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1447  short-chain dehydrogenase/reductase SDR  32.94 
 
 
257 aa  134  9.999999999999999e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013946  Mrub_1897  short-chain dehydrogenase/reductase SDR  33.33 
 
 
247 aa  133  1.9999999999999998e-30  Meiothermus ruber DSM 1279  Bacteria  normal  hitchhiker  0.00100219 
 
 
-
 
NC_008699  Noca_1834  short-chain dehydrogenase/reductase SDR  35.55 
 
 
257 aa  133  3e-30  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_1241  short-chain dehydrogenase/reductase SDR  34.26 
 
 
260 aa  133  3e-30  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0407787  normal  0.415093 
 
 
-
 
NC_013131  Caci_3565  short-chain dehydrogenase/reductase SDR  36.11 
 
 
244 aa  132  5e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010085  Nmar_0634  short-chain dehydrogenase/reductase SDR  32.67 
 
 
253 aa  131  9e-30  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_011126  HY04AAS1_0509  3-oxoacyl-(acyl-carrier-protein) reductase  33.6 
 
 
245 aa  131  9e-30  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_1671  3-oxoacyl-(acyl-carrier-protein) reductase  37.01 
 
 
246 aa  131  9e-30  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1680  short chain dehydrogenase/reductase family oxidoreductase  33.2 
 
 
251 aa  131  1.0000000000000001e-29  Colwellia psychrerythraea 34H  Bacteria  normal  0.447885  n/a   
 
 
-
 
NC_007413  Ava_3338  tropinone reductase  32.02 
 
 
267 aa  130  2.0000000000000002e-29  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0617958 
 
 
-
 
NC_013526  Tter_2517  short-chain dehydrogenase/reductase SDR  35.18 
 
 
257 aa  130  3e-29  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.401645  n/a   
 
 
-
 
NC_009486  Tpet_1020  3-oxoacyl-(acyl-carrier-protein) reductase  34.26 
 
 
246 aa  129  4.0000000000000003e-29  Thermotoga petrophila RKU-1  Bacteria  normal  0.0122832  n/a   
 
 
-
 
NC_013411  GYMC61_2516  short-chain dehydrogenase/reductase SDR  37.85 
 
 
256 aa  129  5.0000000000000004e-29  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010483  TRQ2_1110  3-oxoacyl-(acyl-carrier-protein) reductase  34.26 
 
 
246 aa  128  9.000000000000001e-29  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_2090  short-chain dehydrogenase/reductase SDR  37.05 
 
 
249 aa  127  1.0000000000000001e-28  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.120513 
 
 
-
 
NC_012850  Rleg_4625  short chain dehydrogenase  35.57 
 
 
249 aa  127  1.0000000000000001e-28  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.402352  normal  0.18483 
 
 
-
 
NC_011059  Paes_0175  3-oxoacyl-(acyl-carrier-protein) reductase  33.73 
 
 
247 aa  127  2.0000000000000002e-28  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2365  short-chain dehydrogenase/reductase SDR  36.65 
 
 
249 aa  127  2.0000000000000002e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0450975 
 
 
-
 
NC_008752  Aave_2790  short-chain dehydrogenase/reductase SDR  34.68 
 
 
269 aa  127  2.0000000000000002e-28  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_009427  Saro_3607  short-chain dehydrogenase/reductase SDR  35.63 
 
 
261 aa  127  2.0000000000000002e-28  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.197864  n/a   
 
 
-
 
NC_011894  Mnod_4381  short-chain dehydrogenase/reductase SDR  35.71 
 
 
254 aa  126  4.0000000000000003e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_5682  short-chain dehydrogenase/reductase SDR  35.34 
 
 
239 aa  126  4.0000000000000003e-28  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_0246  short-chain dehydrogenase/reductase SDR  36.9 
 
 
255 aa  125  5e-28  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_1154  7-alpha-hydroxysteroid dehydrogenase  32.67 
 
 
253 aa  125  5e-28  Clostridium perfringens ATCC 13124  Bacteria  decreased coverage  0.000294561  n/a   
 
 
-
 
NC_013739  Cwoe_2104  short-chain dehydrogenase/reductase SDR  37.55 
 
 
250 aa  125  5e-28  Conexibacter woesei DSM 14684  Bacteria  normal  0.0259595  normal 
 
 
-
 
NC_008146  Mmcs_4927  short-chain dehydrogenase/reductase SDR  36.36 
 
 
239 aa  125  6e-28  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2624  3-oxoacyl-(acyl-carrier-protein) reductase  32.28 
 
 
248 aa  125  6e-28  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000000523839  unclonable  0.000000000127004 
 
 
-
 
NC_014150  Bmur_2667  3-oxoacyl-(acyl-carrier-protein) reductase  32.14 
 
 
249 aa  125  6e-28  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.000000000680764  n/a   
 
 
-
 
NC_013510  Tcur_0220  short-chain dehydrogenase/reductase SDR  35.71 
 
 
247 aa  125  6e-28  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5015  short-chain dehydrogenase/reductase SDR  36.36 
 
 
239 aa  125  6e-28  Mycobacterium sp. KMS  Bacteria  normal  normal  0.920793 
 
 
-
 
NC_008262  CPR_0991  7-alpha-hydroxysteroid dehydrogenase  32.67 
 
 
253 aa  125  9e-28  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2011  short-chain dehydrogenase/reductase SDR  35.04 
 
 
255 aa  124  1e-27  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000026464  n/a   
 
 
-
 
NC_011365  Gdia_0891  short-chain dehydrogenase/reductase SDR  36.4 
 
 
260 aa  124  1e-27  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.375615 
 
 
-
 
NC_008782  Ajs_2046  short-chain dehydrogenase/reductase SDR  35.2 
 
 
263 aa  124  1e-27  Acidovorax sp. JS42  Bacteria  decreased coverage  0.00404736  normal 
 
 
-
 
NC_013501  Rmar_2801  3-oxoacyl-(acyl-carrier-protein) reductase  33.73 
 
 
249 aa  124  2e-27  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_1874  3-oxoacyl-[acyl-carrier-protein] reductase  34.01 
 
 
245 aa  124  2e-27  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.00756891  normal 
 
 
-
 
NC_012791  Vapar_0339  short chain dehydrogenase  36.8 
 
 
245 aa  124  2e-27  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_2914  short chain dehydrogenase  33.46 
 
 
255 aa  123  3e-27  Trichodesmium erythraeum IMS101  Bacteria  normal  0.892644  normal  0.135282 
 
 
-
 
NC_011992  Dtpsy_1869  short-chain dehydrogenase/reductase SDR  34.66 
 
 
263 aa  122  5e-27  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2494  3-oxoacyl-(acyl-carrier-protein) reductase  31.75 
 
 
248 aa  122  5e-27  Shewanella pealeana ATCC 700345  Bacteria  unclonable  0.00000000082608  n/a   
 
 
-
 
NC_008254  Meso_1768  3-ketoacyl-(acyl-carrier-protein) reductase NodG  33.07 
 
 
245 aa  122  5e-27  Chelativorans sp. BNC1  Bacteria  normal  0.323162  n/a   
 
 
-
 
NC_013525  Tter_0012  3-oxoacyl-(acyl-carrier-protein) reductase  35.16 
 
 
248 aa  122  5e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010725  Mpop_0259  short-chain dehydrogenase/reductase SDR  35.29 
 
 
249 aa  122  6e-27  Methylobacterium populi BJ001  Bacteria  normal  normal  0.519285 
 
 
-
 
NC_009077  Mjls_5308  short-chain dehydrogenase/reductase SDR  35.57 
 
 
239 aa  122  6e-27  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2445  short-chain dehydrogenase/reductase SDR  33.73 
 
 
257 aa  122  6e-27  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3469  putative short-chain dehydrogenase  35.06 
 
 
252 aa  122  6e-27  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1559  short-chain dehydrogenase/reductase SDR  34.13 
 
 
258 aa  122  6e-27  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00992918 
 
 
-
 
NC_010511  M446_2746  short-chain dehydrogenase/reductase SDR  35.16 
 
 
249 aa  122  7e-27  Methylobacterium sp. 4-46  Bacteria  normal  0.458004  normal  0.197887 
 
 
-
 
NC_014165  Tbis_3519  short-chain dehydrogenase/reductase SDR  33.46 
 
 
252 aa  122  8e-27  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3536  short-chain dehydrogenase/reductase SDR  31.91 
 
 
274 aa  121  9e-27  Polaromonas sp. JS666  Bacteria  normal  normal  0.446578 
 
 
-
 
NC_009092  Shew_1326  short-chain dehydrogenase/reductase SDR  34.66 
 
 
253 aa  121  9e-27  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_5790  short-chain dehydrogenase/reductase SDR  34.51 
 
 
256 aa  121  9.999999999999999e-27  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.0601767 
 
 
-
 
NC_009720  Xaut_1138  short-chain dehydrogenase/reductase SDR  35.57 
 
 
255 aa  121  9.999999999999999e-27  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_1603  3-oxoacyl-(acyl-carrier-protein) reductase  30.16 
 
 
248 aa  121  9.999999999999999e-27  Shewanella loihica PV-4  Bacteria  unclonable  0.0000000401343  decreased coverage  0.000161546 
 
 
-
 
NC_010831  Cphamn1_0180  3-oxoacyl-(acyl-carrier-protein) reductase  32.68 
 
 
245 aa  121  9.999999999999999e-27  Chlorobium phaeobacteroides BS1  Bacteria  hitchhiker  0.00307059  normal 
 
 
-
 
NC_010172  Mext_1326  short-chain dehydrogenase/reductase SDR  34.77 
 
 
254 aa  120  9.999999999999999e-27  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.393683 
 
 
-
 
NC_007005  Psyr_0904  Short-chain dehydrogenase/reductase SDR  34.25 
 
 
254 aa  120  1.9999999999999998e-26  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1473  short-chain dehydrogenase/reductase SDR  32.41 
 
 
249 aa  120  1.9999999999999998e-26  Mycobacterium sp. JLS  Bacteria  normal  0.162054  normal 
 
 
-
 
NC_010505  Mrad2831_3001  short-chain dehydrogenase/reductase SDR  35.29 
 
 
249 aa  120  1.9999999999999998e-26  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0293  short-chain dehydrogenase/reductase SDR  36.22 
 
 
257 aa  120  1.9999999999999998e-26  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.673149  normal 
 
 
-
 
NC_007950  Bpro_5261  short-chain dehydrogenase/reductase SDR  32.94 
 
 
298 aa  120  1.9999999999999998e-26  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_1129  short-chain dehydrogenase/reductase SDR  29.92 
 
 
254 aa  120  1.9999999999999998e-26  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.40266  n/a   
 
 
-
 
NC_008391  Bamb_3531  short chain dehydrogenase  32.2 
 
 
250 aa  120  1.9999999999999998e-26  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_1783  short-chain dehydrogenase/reductase SDR  32.27 
 
 
247 aa  120  1.9999999999999998e-26  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0185042  normal  0.0937687 
 
 
-
 
NC_008705  Mkms_1498  short-chain dehydrogenase/reductase SDR  32.3 
 
 
256 aa  120  1.9999999999999998e-26  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_1182  short-chain dehydrogenase/reductase SDR  34.65 
 
 
263 aa  120  1.9999999999999998e-26  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>