Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3536 |
Symbol | |
ID | 4013799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 3738356 |
End bp | 3739180 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637943198 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_550342 |
Protein GI | 91789390 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.446578 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACTC CAATGCCCGG CTCGTCTTCC GCCATTTCAT TCGGACTGGC CGACCGTGTC TGTATTGTCA CCGGCGGCGC TCAGGGCATT GGCGAGGCCT GCATCCGGCG CTTTGCGCGC GAACAGGCCA AGGTGGTCAT TGCCGATATC GACGACGCCC GGGGCGCTGC GCTGGCCCGC GAAGTGGGCG GCCTGTATGT GCATTGCGAT GTGGGCGACA AGGCTCAGGT CGATGCACTG GTGGCACAAA CCATCGCCGC GCACGGCCGC ATTGATGTGC TGGTAAACAA CGCCGGCATT TTCAGGGCCG CCGATTTTCT GGAAATCACG GAAGCCGACT TCGACGCGGT GCTGCGCATC AACCTCAAAG GCTCGTTTCT GGTGGGCCAG GCGGTGGCGC GCGAAATGGC CAGAGCCGAA GCAAGACCAG GCATCGGCGG GTCCGCCTCG CGGGGCAGCA TCGTCAACAT GAGCTCCGTC AACAGCGTGC TCACAATTCC CACGATTGCC AGCTACAACG TGAGCAAGGG CGGCATCAAC CAGCTCACGC GCGTGATGGC GCTGGCGCTG GCGGACAAAG GCATACGCGT CAATGCGGTC GCCCCTGGCA CCATCGCCAC CGACCTGGCC GCCAAGGCCG TGCTGACCAG TGAAGAGGCC AAAGCCCGCA TCATGAGCCG CACGCCGATG AAGCGCCTGG GTGAACCCTC GGAAATTGCC GACACAGTGG CCTATCTGGC CAGCGATGCG GCCAGCTACA TCACCGGCGA GATCGTGATG GTCGACGGCG GGCGGATGAC GCTGAATTAC ACCGTGTCGG TCTGA
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Protein sequence | MNTPMPGSSS AISFGLADRV CIVTGGAQGI GEACIRRFAR EQAKVVIADI DDARGAALAR EVGGLYVHCD VGDKAQVDAL VAQTIAAHGR IDVLVNNAGI FRAADFLEIT EADFDAVLRI NLKGSFLVGQ AVAREMARAE ARPGIGGSAS RGSIVNMSSV NSVLTIPTIA SYNVSKGGIN QLTRVMALAL ADKGIRVNAV APGTIATDLA AKAVLTSEEA KARIMSRTPM KRLGEPSEIA DTVAYLASDA ASYITGEIVM VDGGRMTLNY TVSV
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