Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_4927 |
Symbol | |
ID | 4113756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 5218095 |
End bp | 5218814 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638034081 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_642087 |
Protein GI | 108801890 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACTGC ACACCTACCG GGCGCTCGTC ACCGGCGGCA CCGCGGGCAT CGGCTTGGCC TGCGCCCACC TTCTGGCCGG CGCCGGCGCC GAGGTGATCG TCACCGGCCG TGACCCGGAA CGCGGCGGGA CCGCTGCCGC CTCCCACGAA CGGATCCGCT TCATCCGAAC CGATATGGCC GATCTCGCAG GCGTCGAATC CCTTGTGCGG CAGGCTGGTG ACATCGACGT GCTGGTCAAC AACGCGGCGA GTTTCCCAGG TGCGGCGACC GTCGATCAGG ACGCCGCGGC GTTCGCGCGC ACCTTCGACA TCAATGTGCG CGGGTCGTAT TTCCTGACCG CCGGACTGGT ACCGGGAATG GTCGCCCGCA AACGCGGAAG CATCGTCAAC ATCACCTCGA TGGTGGCAGC CAAAGGCGTG CCCGCGGCGT CGGTGTACAG CGCTTCGAAA GCGGCGCTGG AGTCCTTGAC CCGCACCTGG GCCGCCGAGT TCGGCAGCCA CGGCGTCCGC GTCAACGCCG TCGCCCCGGG CCCGACGAGA ACCGAAGGCG TCGCGGCCGA GTGGGGCGAG ACCAACGAAG AACTCGGTCG CGCGCTGCCG TTGGGGCGCG TCGCCGAACC GGAGGAGATC GCACAGGCCG TGCTGTTCCT GGCCTCGCCG CGCTCGAGTT TCGTCACGGG AGCCGTCCTG CGCGTCGACG GCGGCGGCGC CGCGATCTGA
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Protein sequence | MELHTYRALV TGGTAGIGLA CAHLLAGAGA EVIVTGRDPE RGGTAAASHE RIRFIRTDMA DLAGVESLVR QAGDIDVLVN NAASFPGAAT VDQDAAAFAR TFDINVRGSY FLTAGLVPGM VARKRGSIVN ITSMVAAKGV PAASVYSASK AALESLTRTW AAEFGSHGVR VNAVAPGPTR TEGVAAEWGE TNEELGRALP LGRVAEPEEI AQAVLFLASP RSSFVTGAVL RVDGGGAAI
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