| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3531 |
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| Symbol | |
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| ID | 4312427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 350096 |
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| End bp | 350848 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638151373 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_775419 |
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| Protein GI | 115358281 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGCT TGCAAGGGAA ACGTACTCTC ATCACTGGAG GCACCAGTGG CATCGGTCTG
GAAACCGCAA AGCAGTTTCT GAATGAAGGC GCCCGCGTCG TCGTTACTGG CGTCAATCCT
GATTCGATCG CGAAAGCTAA AGCCGAACTT GGATCCGAGG TCTTGGTTTT ACGCGCCGAC
TCGGCCAGCG TCGCCGCGCA AAGGGAACTG GCACAAGCCG TCAAGGACCA CTACGGCCAA
CTTGACATCG CCTTCCTCAA TGCCGGCGTA TCCGTCTGGT TGCCGTTCGA GGAGTGGACC
GAAGAGATGT TCGATCGGTC GTTCGATGTC AACGTCAAGG GGCCATACTT CCTGTTCCAG
GCATTGCTTC CAGTGTTCGC TAGCCCTGCG TCCGTAGTGC TCAACACGTC CGTCAGTGCG
CACGTCGGTG CGGAGCGCTC TTCCGTTTAT GCCGCCACCA AGGCAGCGTT TCTGAACATG
TCCAAGACGC TTTCGACCGA ACTGCTTGGA CGCGGGATTC GCGTCAACGC AGTCAGTCCC
GGCCCGATCG ACACTCCGCT GTACGACAAG CTCGGCATCC CCGACGCGTA CCGCGAGCAA
GCCAACAAGG ACATTGCCGC CACCATCCCG CTCGGCCGCT TCGGTACACC GGAGGAGGTG
GCCAAGGCTG TGCTGTATCT AGCCTCCGAC GAGTCCAGTT GGACGGTCGG ATCGGAAATC
GTCGTGGATG GCGGCCGCAT GCTCAACCGC TGA
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| Protein sequence | MSRLQGKRTL ITGGTSGIGL ETAKQFLNEG ARVVVTGVNP DSIAKAKAEL GSEVLVLRAD
SASVAAQREL AQAVKDHYGQ LDIAFLNAGV SVWLPFEEWT EEMFDRSFDV NVKGPYFLFQ
ALLPVFASPA SVVLNTSVSA HVGAERSSVY AATKAAFLNM SKTLSTELLG RGIRVNAVSP
GPIDTPLYDK LGIPDAYREQ ANKDIAATIP LGRFGTPEEV AKAVLYLASD ESSWTVGSEI
VVDGGRMLNR
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