| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1559 |
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| Symbol | |
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| ID | 5704919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 1795159 |
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| End bp | 1795935 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641271070 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001536446 |
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| Protein GI | 159037193 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00992918 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGGATC TGTTCTCGGT GGCCGGCAAG ACCGTTCTGG TCACCGGCGG CTCGCGCGGG
ATCGGCCGGA TGATCGCCGA GGGGTTCGTA CGGGCCGGCG CCCAAGTGAT CATCTCTGCC
CGTACGGCGG ACGTCTGCAC GACGGTCGCC GCGGAGCTGT CGACGCTGGG GCGGTGTACG
GCGATCCCCG TCGACCTCAG CAGCGATGCT GGCGCCGAAG CGCTCGCCGC CGCCGTACGA
GAGCGGCATG AGCAACTCGA CGTGCTGGTC AACAACGCGG GTGCCACCTG GGGCGCACCG
CTTGAGGCCT ACCCGGAGAG CGCGTTCGAC AAGCTCTGGG CGGTCAACGT CAAGGCAGTC
TTCCGGCTCA CCACCGCGCT GCTGCCCGTG CTACGCGCGG CCGGCACCGC GGACGACCCG
GCCCGCGTCA TCAACATCGG CTCGGTCGAC GGGATCAGGG TTCCGTGGAT GGAGGTGTAC
GCGTACTCCG CCACGAAGGC GGCCGTGCAC ATGCTGACCC GCAGCCTCGC TCACCAACTC
GCGGACGAAA ACGTCACCGT CAACGCGATC GCACCCGGGC CGTTCGAGAG CAAGATGATG
GCGTTCGCCC TGGACGACCC CGCCGCCCGG GCCGCGATCG AGAAGCAGGT GCCGCTCGGC
CGTATCGGCC GGCCGGAGGA CATGGCCGGC ACCGCGATCT ACCTGTCGTC GCGTGCCGGC
GCCTACCTGA CCGGCGCGGT CATCCCCGTC GACGGGGGCA TCACCACCCA CGGCTGA
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| Protein sequence | MTDLFSVAGK TVLVTGGSRG IGRMIAEGFV RAGAQVIISA RTADVCTTVA AELSTLGRCT
AIPVDLSSDA GAEALAAAVR ERHEQLDVLV NNAGATWGAP LEAYPESAFD KLWAVNVKAV
FRLTTALLPV LRAAGTADDP ARVINIGSVD GIRVPWMEVY AYSATKAAVH MLTRSLAHQL
ADENVTVNAI APGPFESKMM AFALDDPAAR AAIEKQVPLG RIGRPEDMAG TAIYLSSRAG
AYLTGAVIPV DGGITTHG
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