| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1129 |
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| Symbol | |
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| ID | 4029155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | - |
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| Start bp | 1288147 |
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| End bp | 1288911 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637966306 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_573184 |
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| Protein GI | 92113256 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.40266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTAT TCGATCTCAC CGGCAAGACG GCCCTGATCA CCGGTTCATC CGGCGGCCTC
GGGTATGCCA TGGCCAAGGG CCTGGCGGAA GCCGGCGCGC GCGTGATCGT GCACGGACGC
AACACCGAGA AGCTCGAGCA GGCCCGGCAG GCCCTGGCCG AGGCGCGGCA CGACGTGCTC
GTCACCTCGT TCGATGTCAC CGACGAGGCC GCCATCGAGA GGGCGCTCGC CGACCTCGAC
GCCCAGGGCA TCGACATCGA CATCCTGGTC AACAATGCCG GTATCCAGCT GCGCAAACCG
CTCGTCGAGA CATCCCACGA GGAATGGCAG AAGGTGCTCG ACACCAACCT GAGCAGTACC
TTCCTGATGG GACGCCACGT GGCCAGGCGG ATGATCGCTC GCGGTCAGGG CGGCAAGGTC
GTCAATATCG GCTCGCTGAT GAGCTCGGTG GCCCGTCCGA CGGTCGGTGC CTATACCGCC
GCCAAGGGAG GCGTGCGCCT GATCACGCAG TCGATGGCCG CGGAATGGGC CGAGCACGGC
ATTCAAGCCA ACGCCATCGG CCCCGGCTAC ATGATCACCG AAATGACCCA GCCCCTCGTC
GACAAGCCCG AGTTCAACGA CTGGATCATC AATCGGACGC CCGCGCGCCG CTGGGGCACG
CCGGACGACC TGGTCGGCAC CGTGGTCTAT CTCGCCGCTC CCGCCTCGAA TTTCGTCAAC
GGCCAGATCA TCTATGTCGA CGGCGGTCTG CTCTCGGTGA TTTAG
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| Protein sequence | MTLFDLTGKT ALITGSSGGL GYAMAKGLAE AGARVIVHGR NTEKLEQARQ ALAEARHDVL
VTSFDVTDEA AIERALADLD AQGIDIDILV NNAGIQLRKP LVETSHEEWQ KVLDTNLSST
FLMGRHVARR MIARGQGGKV VNIGSLMSSV ARPTVGAYTA AKGGVRLITQ SMAAEWAEHG
IQANAIGPGY MITEMTQPLV DKPEFNDWII NRTPARRWGT PDDLVGTVVY LAAPASNFVN
GQIIYVDGGL LSVI
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