| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5261 |
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| Symbol | |
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| ID | 4016213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007950 |
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| Strand | - |
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| Start bp | 9506 |
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| End bp | 10402 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637944886 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_552018 |
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| Protein GI | 91791068 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAAT CTGTCTATCA ATCCGTGTTC CGCCCTGGCC TGTTTGCAGG TCAGACTGTT
ATCGTCACCG GCGGTGGCAG TGGCATTGGC CGCTGCACCG CGCACGAGCT GGCCAACCTC
GGCGCCAGTG TGGCTCTAGT GGGCCGAAAG ATCGAGAAGC TGCAGGCGGT GCAGACTGAA
ATCGAAGCTG CCGGCGGCCA AGCCAGTATT CATTCGTGTG ACATCCGCGA CGAGCCGGGC
GTCAAAGCCA TGATCGCCGA CGTGATCGCC CGCCATGGCA AGATCGATGG CCTGGTCAAC
AACGCCGGCG GCCAGTACCC GCAGCCGGTC AAGGACATCA GCCTGAAGGG CTGGGATGCG
GTGGTGCGCA GCAACCTCAC TGGCGGTTTT CTGGTGGCGC GCGAAGCCTT CAACCAGTCC
ATGGCGTTCC ATGGCGGCGC CATCGTCAAC ATCATCGCCG ACATCTGGGG CGGCATGCCC
ACCATGGCGC ACAGCGGCGC GGCACGCGCC GGCATGTTGT CGTTCACCGA GACGGCGGCC
TGCGAATGGG CCTGCGCCGG TGTGCGCGTC AATGCCGTGG CGCCTGGCTG GATTGCCAGC
AGCGGCTTTG ACACCTACAG CCCCGAGATG CAGGCCGAAC TGCGCAGTCT GAAAACCAAG
GTGCCGCTGC AGCGTCATGG CACCGAGTCC GAGGTGTCGG CGGCGATTGT ATTTTTGCTG
TGCGAGGCGG CGGCTTTCAT CACCGGCTCG TGCATTCGGG TCGATGGCGG CGTGCCCAAT
GCCCGCCCGA CCTGGAAACT GCAGGCGCAT GATCGCTCCA AGCCCTTCAA CGGCTTTGCG
CTGTCGCAGG CGCCGAAGTG CCTAAGCGAG GAAGCGCATG GAGGATCGAG GACATGA
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| Protein sequence | MSQSVYQSVF RPGLFAGQTV IVTGGGSGIG RCTAHELANL GASVALVGRK IEKLQAVQTE
IEAAGGQASI HSCDIRDEPG VKAMIADVIA RHGKIDGLVN NAGGQYPQPV KDISLKGWDA
VVRSNLTGGF LVAREAFNQS MAFHGGAIVN IIADIWGGMP TMAHSGAARA GMLSFTETAA
CEWACAGVRV NAVAPGWIAS SGFDTYSPEM QAELRSLKTK VPLQRHGTES EVSAAIVFLL
CEAAAFITGS CIRVDGGVPN ARPTWKLQAH DRSKPFNGFA LSQAPKCLSE EAHGGSRT
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