More than 300 homologs were found in PanDaTox collection
for query gene Krad_3112 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_3112  binding-protein-dependent transport systems inner membrane component  100 
 
 
253 aa  491  9.999999999999999e-139  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0371548 
 
 
-
 
NC_014210  Ndas_4504  binding-protein-dependent transport systems inner membrane component  61.63 
 
 
281 aa  290  1e-77  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_02100  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  60.16 
 
 
308 aa  286  1e-76  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2627  binding-protein-dependent transport systems inner membrane component  57.03 
 
 
288 aa  269  2.9999999999999997e-71  Actinosynnema mirum DSM 43827  Bacteria  normal  0.752734  n/a   
 
 
-
 
NC_008786  Veis_0620  binding-protein-dependent transport systems inner membrane component  40.09 
 
 
254 aa  145  8.000000000000001e-34  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.63161  normal 
 
 
-
 
NC_012791  Vapar_1862  binding-protein-dependent transport systems inner membrane component  37.61 
 
 
257 aa  142  6e-33  Variovorax paradoxus S110  Bacteria  normal  0.116723  n/a   
 
 
-
 
NC_013525  Tter_1221  binding-protein-dependent transport systems inner membrane component  39.89 
 
 
246 aa  141  9e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009669  Oant_4580  binding-protein-dependent transport systems inner membrane component  36.59 
 
 
257 aa  140  1.9999999999999998e-32  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013515  Smon_0476  binding-protein-dependent transport systems inner membrane component  32.27 
 
 
249 aa  140  1.9999999999999998e-32  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  35.11 
 
 
281 aa  139  3.9999999999999997e-32  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_0797  ABC transporter, permease protein, putative  37.77 
 
 
250 aa  138  6e-32  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_3506  binding-protein-dependent transport systems inner membrane component  35.74 
 
 
282 aa  138  1e-31  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0528385  normal  0.0939424 
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  39.32 
 
 
273 aa  137  2e-31  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A0881  putative ABC transporter, permease protein  36.91 
 
 
251 aa  137  2e-31  Bacillus cereus AH187  Bacteria  hitchhiker  0.00328051  n/a   
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  37.28 
 
 
273 aa  137  2e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_3753  binding-protein-dependent transport systems inner membrane component  36.95 
 
 
268 aa  136  3.0000000000000003e-31  Jannaschia sp. CCS1  Bacteria  normal  0.333865  normal 
 
 
-
 
NC_010184  BcerKBAB4_0643  binding-protein-dependent transport systems inner membrane component  36.33 
 
 
251 aa  136  3.0000000000000003e-31  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0637  ABC transporter, permease  36.16 
 
 
250 aa  136  4e-31  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4547  putative ABC transporter, permease protein  36.61 
 
 
251 aa  136  4e-31  Bacillus cereus G9842  Bacteria  normal  0.113137  normal  0.441246 
 
 
-
 
NC_013739  Cwoe_4254  binding-protein-dependent transport systems inner membrane component  36.44 
 
 
283 aa  135  5e-31  Conexibacter woesei DSM 14684  Bacteria  normal  0.0441349  normal  0.902161 
 
 
-
 
NC_003909  BCE_0491  ABC transporter, permease protein, putative  31.11 
 
 
257 aa  135  6.0000000000000005e-31  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0693  ABC transporter permease  36.16 
 
 
250 aa  135  6.0000000000000005e-31  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0637  ABC transporter, permease  36.16 
 
 
250 aa  135  6.0000000000000005e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00537874  n/a   
 
 
-
 
NC_006274  BCZK0354  ABC transporter, permease  30.67 
 
 
265 aa  135  6.0000000000000005e-31  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0381  ABC transporter permease  31.11 
 
 
257 aa  135  6.0000000000000005e-31  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0727  ABC transporter permease  36.16 
 
 
250 aa  135  6.0000000000000005e-31  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0363276  n/a   
 
 
-
 
NC_011773  BCAH820_0424  putative ABC transporter, permease protein  31.11 
 
 
257 aa  135  6.0000000000000005e-31  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013739  Cwoe_3810  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
258 aa  135  6.0000000000000005e-31  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.42897 
 
 
-
 
NC_011658  BCAH187_A0493  putative ABC transporter, permease protein  31.28 
 
 
257 aa  135  6.0000000000000005e-31  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0367  ABC transporter permease  31.11 
 
 
265 aa  135  8e-31  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0357  ABC transporter, permease  31.11 
 
 
265 aa  135  8e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0804  putative ABC transporter, permease protein  35.71 
 
 
250 aa  134  9.999999999999999e-31  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.22036e-46 
 
 
-
 
NC_012792  Vapar_6052  binding-protein-dependent transport systems inner membrane component  34.82 
 
 
274 aa  133  1.9999999999999998e-30  Variovorax paradoxus S110  Bacteria  normal  0.0454164  n/a   
 
 
-
 
NC_011772  BCG9842_B4878  putative ABC transporter, permease protein  30.67 
 
 
255 aa  134  1.9999999999999998e-30  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0891  binding-protein-dependent transport systems inner membrane component  36.4 
 
 
268 aa  134  1.9999999999999998e-30  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.223421 
 
 
-
 
NC_010184  BcerKBAB4_0362  binding-protein-dependent transport systems inner membrane component  32.13 
 
 
255 aa  133  3e-30  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_3205  binding-protein-dependent transport systems inner membrane component  29.82 
 
 
265 aa  133  3e-30  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000457845  n/a   
 
 
-
 
NC_013165  Shel_13670  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  34.23 
 
 
249 aa  132  6e-30  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A0784  putative ABC transporter, permease protein  35.27 
 
 
250 aa  132  6e-30  Bacillus cereus B4264  Bacteria  normal  0.605831  n/a   
 
 
-
 
NC_007509  Bcep18194_C7650  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  39.46 
 
 
247 aa  132  6.999999999999999e-30  Burkholderia sp. 383  Bacteria  normal  0.621765  normal 
 
 
-
 
NC_007802  Jann_2700  binding-protein-dependent transport systems inner membrane component  37.33 
 
 
316 aa  132  6.999999999999999e-30  Jannaschia sp. CCS1  Bacteria  normal  0.505407  normal  0.565906 
 
 
-
 
NC_008044  TM1040_1494  binding-protein-dependent transport systems inner membrane component  38.46 
 
 
281 aa  131  7.999999999999999e-30  Ruegeria sp. TM1040  Bacteria  normal  0.58323  normal 
 
 
-
 
NC_009485  BBta_1169  putative ABC transporter permease protein  38.58 
 
 
279 aa  132  7.999999999999999e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1719  binding-protein-dependent transport systems inner membrane component  37.2 
 
 
264 aa  130  2.0000000000000002e-29  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_0614  binding-protein-dependent transport systems inner membrane component  35.25 
 
 
250 aa  130  2.0000000000000002e-29  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_2038  binding-protein-dependent transport systems inner membrane component  36.8 
 
 
264 aa  129  3e-29  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.697058  normal  0.743835 
 
 
-
 
NC_011725  BCB4264_A0446  putative ABC transporter, permease protein  30.22 
 
 
257 aa  129  3e-29  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0370  binding-protein-dependent transport systems inner membrane component  30.22 
 
 
256 aa  129  4.0000000000000003e-29  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1140  binding-protein-dependent transport systems inner membrane component  30.98 
 
 
255 aa  129  4.0000000000000003e-29  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_3419  binding-protein-dependent transport systems inner membrane component  35.51 
 
 
258 aa  129  5.0000000000000004e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.121812  n/a   
 
 
-
 
NC_009012  Cthe_2116  binding-protein-dependent transport systems inner membrane component  29.83 
 
 
253 aa  129  5.0000000000000004e-29  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_1625  binding-protein-dependent transport systems inner membrane component  35.18 
 
 
285 aa  128  7.000000000000001e-29  Trichodesmium erythraeum IMS101  Bacteria  normal  0.0792607  normal  0.95709 
 
 
-
 
NC_009952  Dshi_1373  binding-protein-dependent transport systems inner membrane component  37.44 
 
 
303 aa  128  9.000000000000001e-29  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.674946  normal  0.833857 
 
 
-
 
NC_011830  Dhaf_0877  binding-protein-dependent transport systems inner membrane component  34.07 
 
 
260 aa  128  1.0000000000000001e-28  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00000000112184  n/a   
 
 
-
 
NC_008254  Meso_2046  binding-protein-dependent transport systems inner membrane component  39.56 
 
 
286 aa  128  1.0000000000000001e-28  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1095  binding-protein-dependent transport systems inner membrane component  38.67 
 
 
264 aa  128  1.0000000000000001e-28  Methylobacterium populi BJ001  Bacteria  normal  0.0240883  normal  0.166534 
 
 
-
 
NC_010681  Bphyt_1488  binding-protein-dependent transport systems inner membrane component  36.86 
 
 
247 aa  128  1.0000000000000001e-28  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2015  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  37.77 
 
 
252 aa  127  2.0000000000000002e-28  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2099  binding-protein-dependent transport systems inner membrane component  40.21 
 
 
306 aa  127  2.0000000000000002e-28  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2372  binding-protein-dependent transport systems inner membrane component  37.79 
 
 
289 aa  126  3e-28  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.239724 
 
 
-
 
NC_010001  Cphy_1151  binding-protein-dependent transport systems inner membrane component  33.63 
 
 
254 aa  125  4.0000000000000003e-28  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_3460  ABC transporter membrane spanning protein  36.75 
 
 
288 aa  125  5e-28  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3093  binding-protein dependent transport system inner membrane protein  33.03 
 
 
259 aa  125  6e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.942666 
 
 
-
 
NC_012791  Vapar_3961  binding-protein-dependent transport systems inner membrane component  31.2 
 
 
256 aa  125  8.000000000000001e-28  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5406  ABC transporter membrane spanning protein  34.23 
 
 
251 aa  125  9e-28  Agrobacterium vitis S4  Bacteria  normal  0.408693  n/a   
 
 
-
 
NC_013946  Mrub_1076  ABC transporter-like protein  36.84 
 
 
488 aa  124  1e-27  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.276573 
 
 
-
 
NC_012850  Rleg_3297  binding-protein-dependent transport systems inner membrane component  35.47 
 
 
375 aa  124  1e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.149558 
 
 
-
 
NC_007953  Bxe_C0801  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  34.51 
 
 
298 aa  124  1e-27  Burkholderia xenovorans LB400  Bacteria  normal  0.0745387  normal 
 
 
-
 
NC_013203  Apar_0391  binding-protein-dependent transport systems inner membrane component  33.03 
 
 
257 aa  124  1e-27  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2588  binding-protein-dependent transport systems inner membrane component  37.22 
 
 
267 aa  124  1e-27  Pseudomonas putida W619  Bacteria  normal  normal  0.417353 
 
 
-
 
NC_009668  Oant_3871  binding-protein-dependent transport systems inner membrane component  34.78 
 
 
280 aa  124  1e-27  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.208081  n/a   
 
 
-
 
NC_012791  Vapar_4760  binding-protein-dependent transport systems inner membrane component  36.71 
 
 
267 aa  123  3e-27  Variovorax paradoxus S110  Bacteria  normal  0.318809  n/a   
 
 
-
 
NC_011365  Gdia_3269  binding-protein-dependent transport systems inner membrane component  38.89 
 
 
253 aa  123  3e-27  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.283078  normal 
 
 
-
 
NC_011757  Mchl_2050  binding-protein-dependent transport systems inner membrane component  39.25 
 
 
321 aa  123  3e-27  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.577348 
 
 
-
 
NC_010524  Lcho_1095  binding-protein-dependent transport systems inner membrane component  30.89 
 
 
255 aa  122  4e-27  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007973  Rmet_0394  binding-protein-dependent transport systems inner membrane component  33.03 
 
 
259 aa  122  6e-27  Cupriavidus metallidurans CH34  Bacteria  normal  hitchhiker  0.00657833 
 
 
-
 
NC_002947  PP_3210  ABC transporter, permease protein  36.77 
 
 
267 aa  121  9e-27  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4527  binding-protein-dependent transport systems inner membrane component  45.4 
 
 
253 aa  121  9e-27  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1731  binding-protein-dependent transport systems inner membrane component  38.79 
 
 
321 aa  121  9e-27  Methylobacterium extorquens PA1  Bacteria  normal  0.443029  normal 
 
 
-
 
NC_009485  BBta_1263  ABC transporter permease  36.77 
 
 
262 aa  121  9.999999999999999e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.165267 
 
 
-
 
NC_009952  Dshi_2545  binding-protein-dependent transport system protein  35.23 
 
 
287 aa  121  9.999999999999999e-27  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.240068  normal  0.521676 
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  36.92 
 
 
261 aa  120  1.9999999999999998e-26  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_009428  Rsph17025_1465  binding-protein-dependent transport systems inner membrane component  35.47 
 
 
283 aa  120  1.9999999999999998e-26  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0037  binding-protein-dependent transport systems inner membrane component  39.69 
 
 
362 aa  119  3e-26  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_2296  binding-protein-dependent transport systems inner membrane component  35.56 
 
 
250 aa  119  3.9999999999999996e-26  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7629  putative ABC transporter permease protein  32.59 
 
 
282 aa  119  4.9999999999999996e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.262472  normal  0.441686 
 
 
-
 
NC_009524  PsycPRwf_1445  binding-protein-dependent transport systems inner membrane component  31.31 
 
 
259 aa  119  6e-26  Psychrobacter sp. PRwf-1  Bacteria  normal  normal  0.318112 
 
 
-
 
NC_013946  Mrub_1393  binding-protein-dependent transport systems inner membrane component  34.08 
 
 
254 aa  119  6e-26  Meiothermus ruber DSM 1279  Bacteria  normal  0.302994  normal  0.157809 
 
 
-
 
NC_011369  Rleg2_3042  binding-protein-dependent transport systems inner membrane component  34.25 
 
 
375 aa  118  7.999999999999999e-26  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1883  binding-protein-dependent transport systems inner membrane component  35 
 
 
322 aa  118  7.999999999999999e-26  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.167871 
 
 
-
 
NC_013235  Namu_1668  binding-protein-dependent transport systems inner membrane component  34.98 
 
 
288 aa  118  9.999999999999999e-26  Nakamurella multipartita DSM 44233  Bacteria  normal  0.173855  normal  0.365472 
 
 
-
 
NC_009667  Oant_0278  binding-protein-dependent transport systems inner membrane component  35.16 
 
 
258 aa  117  9.999999999999999e-26  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_3758  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
256 aa  117  1.9999999999999998e-25  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_0427  binding-protein-dependent transport systems inner membrane component  38.67 
 
 
279 aa  117  1.9999999999999998e-25  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_012852  Rleg_6281  binding-protein-dependent transport systems inner membrane component  34.22 
 
 
256 aa  117  1.9999999999999998e-25  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.783663  normal 
 
 
-
 
NC_008148  Rxyl_3035  binding-protein-dependent transport systems inner membrane component  30.83 
 
 
256 aa  117  1.9999999999999998e-25  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2127  binding-protein-dependent transport systems inner membrane component  30.97 
 
 
255 aa  117  1.9999999999999998e-25  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.427162 
 
 
-
 
NC_012850  Rleg_3934  binding-protein-dependent transport systems inner membrane component  34.38 
 
 
278 aa  116  3e-25  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.421742  normal 
 
 
-
 
NC_008148  Rxyl_2084  binding-protein-dependent transport systems inner membrane component  40.45 
 
 
260 aa  116  3e-25  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.566245  n/a   
 
 
-
 
NC_009428  Rsph17025_1464  binding-protein-dependent transport systems inner membrane component  34.36 
 
 
287 aa  116  3e-25  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
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