More than 300 homologs were found in PanDaTox collection
for query gene Cyan7425_4597 on replicon NC_011884
Organism: Cyanothece sp. PCC 7425



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011884  Cyan7425_4597  TRAP transporter solute receptor, TAXI family  100 
 
 
454 aa  926    Cyanothece sp. PCC 7425  Bacteria  normal  0.244351  normal 
 
 
-
 
NC_011729  PCC7424_4573  TRAP transporter solute receptor, TAXI family  42 
 
 
446 aa  357  1.9999999999999998e-97  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011884  Cyan7425_4331  TRAP transporter solute receptor, TAXI family  36.54 
 
 
453 aa  282  1e-74  Cyanothece sp. PCC 7425  Bacteria  normal  0.794472  normal 
 
 
-
 
NC_008025  Dgeo_1063  TRAP transporter solute receptor TAXI family protein  31.85 
 
 
317 aa  142  9e-33  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.745912 
 
 
-
 
NC_008554  Sfum_3723  TRAP transporter solute receptor TAXI family protein  26.57 
 
 
316 aa  142  9.999999999999999e-33  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0409  TRAP transporter solute receptor, TAXI family  25.06 
 
 
462 aa  135  1.9999999999999998e-30  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.309942  n/a   
 
 
-
 
NC_011757  Mchl_0184  TRAP-type uncharacterized transport system periplasmic component-like protein  24.94 
 
 
453 aa  134  3e-30  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.864216  normal  0.611675 
 
 
-
 
NC_010172  Mext_0239  TRAP-type uncharacterized transport system periplasmic component-like protein  24.7 
 
 
453 aa  133  7.999999999999999e-30  Methylobacterium extorquens PA1  Bacteria  normal  0.264256  normal 
 
 
-
 
NC_014212  Mesil_2159  TRAP transporter solute receptor, TAXI family  27.12 
 
 
317 aa  130  6e-29  Meiothermus silvanus DSM 9946  Bacteria  normal  0.239874  normal  0.13141 
 
 
-
 
NC_013512  Sdel_0314  TRAP transporter solute receptor, TAXI family  27.78 
 
 
317 aa  128  3e-28  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.889469  n/a   
 
 
-
 
NC_011894  Mnod_0342  TRAP transporter solute receptor, TAXI family  27 
 
 
423 aa  127  5e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0450847  n/a   
 
 
-
 
NC_013522  Taci_0817  TRAP transporter solute receptor, TAXI family  26.92 
 
 
318 aa  125  1e-27  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  unclonable  0.0000000102609  n/a   
 
 
-
 
NC_010511  M446_1581  TRAP transporter solute receptor TAXI family protein  25.44 
 
 
457 aa  122  9.999999999999999e-27  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.193293 
 
 
-
 
NC_009953  Sare_1695  TRAP transporter solute receptor TAXI family protein  31.58 
 
 
315 aa  122  9.999999999999999e-27  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.000228802 
 
 
-
 
NC_009380  Strop_1697  TRAP transporter solute receptor TAXI family protein  30.88 
 
 
330 aa  122  9.999999999999999e-27  Salinispora tropica CNB-440  Bacteria  normal  0.607751  normal  0.828936 
 
 
-
 
NC_009620  Smed_3839  TRAP transporter solute receptor TAXI family protein  28.38 
 
 
327 aa  122  9.999999999999999e-27  Sinorhizobium medicae WSM419  Bacteria  normal  0.0135422  normal 
 
 
-
 
NC_007204  Psyc_0746  TRAP-T family transporter periplasmic substrate binding subunit  27.7 
 
 
344 aa  121  1.9999999999999998e-26  Psychrobacter arcticus 273-4  Bacteria  normal  0.842378  normal 
 
 
-
 
NC_010511  M446_2265  TRAP transporter solute receptor TAXI family protein  25.19 
 
 
442 aa  120  3.9999999999999996e-26  Methylobacterium sp. 4-46  Bacteria  normal  decreased coverage  0.00194673 
 
 
-
 
NC_013926  Aboo_1472  TRAP transporter solute receptor, TAXI family  27.4 
 
 
651 aa  120  4.9999999999999996e-26  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_5654  TRAP-type uncharacterized transport system periplasmic component-like protein  24.75 
 
 
471 aa  120  6e-26  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_3213  TRAP transporter solute receptor TAXI family protein  24.74 
 
 
325 aa  120  6e-26  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_4219  TRAP-type uncharacterized transport system periplasmic component-like protein  25.4 
 
 
465 aa  120  7e-26  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.340628 
 
 
-
 
NC_007958  RPD_0702  TRAP transporter solute receptor TAXI family protein  23.8 
 
 
480 aa  119  7.999999999999999e-26  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.871087  normal 
 
 
-
 
NC_009438  Sputcn32_3381  TRAP transporter solute receptor TAXI family protein  28.57 
 
 
318 aa  118  1.9999999999999998e-25  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_1613  TRAP dicarboxylate family transporter DctP subunit  25.68 
 
 
317 aa  116  7.999999999999999e-25  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0267  TRAP transporter solute receptor TAXI family protein  25.68 
 
 
317 aa  116  8.999999999999998e-25  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.418804  normal 
 
 
-
 
NC_009485  BBta_0249  hypothetical protein  22.56 
 
 
448 aa  116  8.999999999999998e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3828  TRAP transporter solute receptor, TAXI family  25.93 
 
 
318 aa  116  1.0000000000000001e-24  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0433  TRAP transporter solute receptor TAXI family protein  25.93 
 
 
318 aa  116  1.0000000000000001e-24  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_4024  TRAP transporter solute receptor TAXI family protein  25.93 
 
 
318 aa  116  1.0000000000000001e-24  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_007969  Pcryo_0741  TRAP transporter solute receptor TAXI family protein  28.04 
 
 
348 aa  115  1.0000000000000001e-24  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3901  TRAP transporter solute receptor TAXI family protein  25.93 
 
 
318 aa  116  1.0000000000000001e-24  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0100  TRAP transporter solute receptor TAXI family protein  22.83 
 
 
480 aa  114  3e-24  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_014150  Bmur_0797  TRAP transporter solute receptor, TAXI family  24.74 
 
 
318 aa  114  3e-24  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.00000423237  n/a   
 
 
-
 
NC_011662  Tmz1t_0431  TRAP transporter solute receptor, TAXI family  25 
 
 
316 aa  114  3e-24  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_4560  TRAP transporter solute receptor TAXI family protein  25.52 
 
 
317 aa  113  6e-24  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2525  TRAP transporter solute receptor TAXI family protein  22.74 
 
 
486 aa  112  1.0000000000000001e-23  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.839724  normal  0.154925 
 
 
-
 
NC_008345  Sfri_3566  TRAP transporter solute receptor, TAXI family protein  26.55 
 
 
317 aa  112  1.0000000000000001e-23  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.28304  n/a   
 
 
-
 
NC_009428  Rsph17025_0290  TRAP transporter solute receptor TAXI family protein  26.69 
 
 
317 aa  112  2.0000000000000002e-23  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0541635  normal 
 
 
-
 
NC_009656  PSPA7_6347  hypothetical protein  26.21 
 
 
319 aa  110  5e-23  Pseudomonas aeruginosa PA7  Bacteria  normal  0.884307  n/a   
 
 
-
 
NC_009429  Rsph17025_3688  hypothetical protein  26.53 
 
 
324 aa  109  8.000000000000001e-23  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.269569 
 
 
-
 
NC_010725  Mpop_2259  TRAP-type uncharacterized transport system periplasmic component-like protein  22.89 
 
 
469 aa  109  9.000000000000001e-23  Methylobacterium populi BJ001  Bacteria  normal  0.466386  normal  0.36502 
 
 
-
 
NC_013946  Mrub_1635  TAXI family TRAP transporter solute receptor  26.62 
 
 
315 aa  109  1e-22  Meiothermus ruber DSM 1279  Bacteria  normal  0.0832335  normal 
 
 
-
 
NC_004347  SO_0456  immunogenic-related protein  25.39 
 
 
318 aa  109  1e-22  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007908  Rfer_1040  TRAP transporter solute receptor TAXI family protein  26.71 
 
 
324 aa  109  1e-22  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_2760  TRAP transporter solute receptor, TAXI family  25.77 
 
 
433 aa  109  1e-22  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_004310  BR1194  TRAP transporter solute receptor TAXI family protein  26.19 
 
 
329 aa  108  2e-22  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2004  TRAP transporter solute receptor TAXI family protein  26.69 
 
 
338 aa  108  2e-22  Polaromonas sp. JS666  Bacteria  normal  0.373091  normal 
 
 
-
 
NC_011757  Mchl_2577  TRAP-type uncharacterized transport system periplasmic component-like protein  23.02 
 
 
469 aa  107  3e-22  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.301233 
 
 
-
 
NC_010172  Mext_2302  TRAP-type uncharacterized transport system periplasmic component-like protein  23.02 
 
 
474 aa  107  4e-22  Methylobacterium extorquens PA1  Bacteria  normal  0.172272  hitchhiker  0.00762339 
 
 
-
 
NC_008254  Meso_4067  TRAP transporter solute receptor TAXI family protein  23.88 
 
 
318 aa  107  5e-22  Chelativorans sp. BNC1  Bacteria  normal  0.548232  n/a   
 
 
-
 
NC_011004  Rpal_2087  hypothetical protein  23.8 
 
 
466 aa  105  1e-21  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.073016  n/a   
 
 
-
 
NC_007963  Csal_2671  TRAP transporter solute receptor TAXI family protein  28.47 
 
 
325 aa  106  1e-21  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_2072  TRAP transporter solute receptor TAXI family protein  26.12 
 
 
317 aa  105  1e-21  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.169091 
 
 
-
 
NC_008463  PA14_73120  hypothetical protein  25.52 
 
 
319 aa  106  1e-21  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3954  periplasmic binding protein, putative  25.17 
 
 
316 aa  105  2e-21  Pseudomonas putida KT2440  Bacteria  normal  normal  0.391333 
 
 
-
 
NC_009439  Pmen_4446  TRAP transporter solute receptor TAXI family protein  27.27 
 
 
323 aa  105  2e-21  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_1413  TRAP-T family transporter periplasmic binding component  25.34 
 
 
324 aa  105  2e-21  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2949  TRAP transporter solute receptor TAXI family protein  25.86 
 
 
318 aa  105  2e-21  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0733999 
 
 
-
 
NC_007908  Rfer_1635  TRAP transporter solute receptor TAXI family protein  24.66 
 
 
319 aa  105  2e-21  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2063  TRAP transporter solute receptor TAXI family protein  25.17 
 
 
327 aa  105  2e-21  Marinobacter aquaeolei VT8  Bacteria  normal  0.800081  n/a   
 
 
-
 
NC_009050  Rsph17029_3483  TRAP transporter solute receptor TAXI family protein  25.34 
 
 
324 aa  105  2e-21  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_2036  TRAP-type uncharacterized transport system periplasmic component-like protein  23.25 
 
 
463 aa  103  5e-21  Methylobacterium sp. 4-46  Bacteria  normal  hitchhiker  0.00372211 
 
 
-
 
NC_009505  BOV_1156  31 kDa immunogenic protein  25.33 
 
 
316 aa  103  5e-21  Brucella ovis ATCC 25840  Bacteria  normal  0.837242  n/a   
 
 
-
 
NC_008321  Shewmr4_0461  TRAP transporter solute receptor TAXI family protein  25.39 
 
 
318 aa  103  5e-21  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3568  TRAP transporter solute receptor TAXI family protein  25.39 
 
 
318 aa  103  5e-21  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0457  response regulator receiver protein  25.39 
 
 
318 aa  103  5e-21  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3495  hypothetical protein  22.85 
 
 
465 aa  103  7e-21  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_4226  TRAP transporter solute receptor TAXI family protein  23.88 
 
 
317 aa  103  8e-21  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0963703  normal  0.823727 
 
 
-
 
NC_009783  VIBHAR_02419  hypothetical protein  24.57 
 
 
323 aa  103  8e-21  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_014210  Ndas_4512  TRAP transporter solute receptor, TAXI family  26.28 
 
 
299 aa  103  8e-21  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_003379  immunogenic protein  24.57 
 
 
323 aa  103  9e-21  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1764  TRAP transporter solute receptor TAXI family protein  28.62 
 
 
323 aa  103  9e-21  Marinomonas sp. MWYL1  Bacteria  normal  0.513988  normal 
 
 
-
 
NC_010505  Mrad2831_3542  TRAP-type uncharacterized transport system periplasmic component-like protein  23.02 
 
 
472 aa  102  1e-20  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.919124 
 
 
-
 
NC_010581  Bind_0899  hypothetical protein  23.45 
 
 
437 aa  102  1e-20  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.727607  normal  0.541745 
 
 
-
 
NC_011004  Rpal_5002  TRAP transporter solute receptor, TAXI family  24.74 
 
 
315 aa  101  2e-20  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.117483  n/a   
 
 
-
 
NC_008044  TM1040_1252  TRAP transporter solute receptor TAXI family protein  24.85 
 
 
323 aa  101  2e-20  Ruegeria sp. TM1040  Bacteria  normal  0.0250918  normal 
 
 
-
 
NC_013889  TK90_1890  TRAP transporter solute receptor, TAXI family  24.7 
 
 
333 aa  101  2e-20  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.966009  normal 
 
 
-
 
NC_008686  Pden_0664  TRAP transporter solute receptor TAXI family protein  28.3 
 
 
333 aa  101  2e-20  Paracoccus denitrificans PD1222  Bacteria  normal  0.613063  normal 
 
 
-
 
NC_009667  Oant_2429  TRAP transporter solute receptor TAXI family protein  24.83 
 
 
329 aa  101  3e-20  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.25673  n/a   
 
 
-
 
NC_009523  RoseRS_3440  TRAP transporter solute receptor TAXI family protein  24.1 
 
 
342 aa  101  3e-20  Roseiflexus sp. RS-1  Bacteria  normal  0.93321  normal  0.103466 
 
 
-
 
NC_013173  Dbac_0033  TRAP transporter solute receptor, TAXI family  26.32 
 
 
319 aa  101  3e-20  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_4417  TRAP transporter solute receptor TAXI family protein  23.74 
 
 
348 aa  100  4e-20  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.0674202 
 
 
-
 
NC_011894  Mnod_0107  TRAP-type uncharacterized transport system periplasmic component-like protein  27.55 
 
 
453 aa  100  4e-20  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A2848  immunogenic protein  24.83 
 
 
328 aa  100  8e-20  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4400  TRAP transporter solute receptor TAXI family protein  24.75 
 
 
315 aa  99.8  8e-20  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.478919  normal  0.223671 
 
 
-
 
NC_011312  VSAL_I0356  hypothetical protein  25.08 
 
 
324 aa  99.8  8e-20  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.097907  n/a   
 
 
-
 
NC_007778  RPB_4331  TRAP transporter solute receptor TAXI family protein  24.4 
 
 
315 aa  99.8  9e-20  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0888724 
 
 
-
 
NC_009783  VIBHAR_00793  hypothetical protein  24.83 
 
 
322 aa  98.6  2e-19  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007799  ECH_0645  immunogenic protein  25.34 
 
 
325 aa  98.6  2e-19  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  0.208055  n/a   
 
 
-
 
NC_011666  Msil_3025  TRAP transporter solute receptor, TAXI family  22.59 
 
 
441 aa  97.8  4e-19  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007643  Rru_A0608  TRAP transporter solute receptor TAXI family protein  25.34 
 
 
326 aa  96.3  1e-18  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.516133  n/a   
 
 
-
 
NC_007964  Nham_0909  hypothetical protein  19.95 
 
 
491 aa  96.3  1e-18  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1537  hypothetical protein  26.82 
 
 
318 aa  95.5  2e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  0.391308  normal  0.296954 
 
 
-
 
NC_007802  Jann_2878  TRAP transporter solute receptor TAXI family protein  28.33 
 
 
335 aa  95.1  2e-18  Jannaschia sp. CCS1  Bacteria  normal  0.082119  normal 
 
 
-
 
NC_007958  RPD_1959  hypothetical protein  21.08 
 
 
467 aa  95.1  2e-18  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_001678  TRAP transporter solute receptor TAXI family precursor  24.24 
 
 
322 aa  94.7  3e-18  Vibrio sp. Ex25  Bacteria  normal  0.150837  n/a   
 
 
-
 
NC_009485  BBta_0937  putative TRAP-type uncharacterized transport system, periplasmic component  24.57 
 
 
320 aa  94.7  3e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_4101  TRAP transporter solute receptor TAXI family protein  24.28 
 
 
317 aa  94.4  4e-18  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.32075  n/a   
 
 
-
 
NC_011894  Mnod_0519  TRAP-type uncharacterized transport system periplasmic component-like protein  22.89 
 
 
463 aa  94.4  4e-18  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
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