| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1959 |
|---|
| Symbol | |
|---|
| ID | 4022441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 2199725 |
|---|
| End bp | 2201128 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637962152 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_569095 |
|---|
| Protein GI | 91976436 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGA TGGCATCGCC TGACGGCGGC GACTCCCTGC GCAAGCGACG CAGGCGCAAC
CGCGCCCGGC TGATGCTGGC GACGGTGCTG ACCGTGGTCG GGCTCGTGGC CGGCGCGCTC
GGCGTGCTGC TTTACGAGCT GCGGCCGGTG ACGCTGCGGA TCGCGGTCGG GCCGCAGGGC
AGCGACGACA TCAAGCTGAT CCAGGCTCTG GCGCAGACCT TCGCGCGCGA CCGCAGCTCG
GTGCGGCTGA CGCCGGTGGT CACCGACGGC GCGACGCCGA GTCTGGGCGA ATGGACCAAG
GGCAACGCCG ACCTCGCCGT CACCCGCGGC GATCTCGATC TGCCGACCGA CGCGCAATCG
GTCGCGATCC TGCGCAAGAA CGTCGTGACG CTGTGGTCGG TGCCCGGCAA GAGCAAGAAA
TCCGGCACGG TGAAAAGCAT TGCCGATCTC GCCGGCCGCA AGGTCGGCGT CATCGGCCGC
ACCCCGGCCA ACGTCAAGCT GCTCCAGGTG ATCCTGTCCG AGTCGGGCGT CGCGCCGGAC
AAGGTGCAGA CCGAGCAATT CGCCACCACG GCGATCGCCG AGATGGCGCG CGACGAGTCG
CTTGCCGCTT ATCTGGCGGT CGGGCCGCTC GACAGCAAGA CCACGGCGGA AGCGATCGCC
GCCACCGCGA AGGCCCGCGG CGAGCCACGC TTCCTGCCGA TCGATGTCGG CGACTCGATC
GCCAAGAAGT ATCCGATCTA CGATTCCGAG GAGATCCCCG GCAGCACCTT CTCGACCGCG
CCGGCGCGGC CGGAGGACAA GGTCGACACC GTCAGCGTCA ACCATCTGAT CATCGCCAAG
CGCGCGCTGT CGAGCGTCAC CGTCGCGCAG CTCACCCGGC AGATCTTCGC CGCGCGGCAG
CAGCTCGCGC GCGAACTGCC GACCGCCGGC AAGATCGAGG CGCCCGACAC CGACAAGGCC
GCAGCGCTGC CGGCGCATCG CGGCGCCGCC GCCTTCATCG ACGGCACCGA GCGCACCTTC
ATGGAGCGCA ACAGCGACTA CATCTGGGGC CTGGTGGTGC TGCTATCCGG CCTCGGCTCG
GCCGGTGCGT GGTTTCGGTC CTACGTCACC CGCGACGAAC GCGCCGCAAG CGCCAGGATG
CGCGACCGCG CGCTGGCGAT GGTCGCCAAG GCGCGAAAGG CCAATTCGCT CGACGAACTC
GACCACATGC AGCACGAGAT CGATCGCATC GTACGCGACA TGCTGGATTG CTACGACGAC
GGCGCGATCG ACGATCTGGC GCCATTCAAT CTGGTGCTCG ATCAGTTCCA CAACGCTTTG
GTCGATCGGC GCAAGACGCT GACGATGCCG AGCGCCGGCA TTGCGCCGTC GCACCCCGAA
ACCGTCGGCG TCCCGGGCGA CTAG
|
|---|
| Protein sequence | MTAMASPDGG DSLRKRRRRN RARLMLATVL TVVGLVAGAL GVLLYELRPV TLRIAVGPQG
SDDIKLIQAL AQTFARDRSS VRLTPVVTDG ATPSLGEWTK GNADLAVTRG DLDLPTDAQS
VAILRKNVVT LWSVPGKSKK SGTVKSIADL AGRKVGVIGR TPANVKLLQV ILSESGVAPD
KVQTEQFATT AIAEMARDES LAAYLAVGPL DSKTTAEAIA ATAKARGEPR FLPIDVGDSI
AKKYPIYDSE EIPGSTFSTA PARPEDKVDT VSVNHLIIAK RALSSVTVAQ LTRQIFAARQ
QLARELPTAG KIEAPDTDKA AALPAHRGAA AFIDGTERTF MERNSDYIWG LVVLLSGLGS
AGAWFRSYVT RDERAASARM RDRALAMVAK ARKANSLDEL DHMQHEIDRI VRDMLDCYDD
GAIDDLAPFN LVLDQFHNAL VDRRKTLTMP SAGIAPSHPE TVGVPGD
|
|---|
| |