| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3495 |
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| Symbol | |
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| ID | 3911297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3998763 |
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| End bp | 4000160 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637885397 |
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| Product | hypothetical protein |
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| Protein accession | YP_487101 |
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| Protein GI | 86750605 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCTCGT CTGACGGCGG CGGCGAGTCG CTGCGCAAGC GGCGGCAGCG CAATCGTGCG
CGGCTGCGGC TGGCGACCGC GCTGACCGTG ATTGCGCTGG TCGCGGGCGC GCTCGGGGTG
CTGTTCTACG AATTGCGGCC GGTGACGTTG CGGATCGCGG TGGGGCCGCC GGGCAGCGAC
GATCTCAAGC TGATTCAGGC GCTGGCGCAG ACCTTCGTGC GCGATCGCAG TGCGGTACGG
CTGACGCCGG TGACGACCGA CGGCGCGACG CCGAGTCTGT CCGCATGGCG CGAGGGCCGC
GCCGATCTCG CCGTCACCCG CGGCGACCTC GATCTGCCGA CCGACGCGCA AGCGGTCGCG
ATCCTGCGCA AGAACGTGGT GACGCTGTGG GCGTTGCCGG GCAGGGGCAA GAAGCCGGTC
GCGGTGAAGA GCATCGCCGA GCTCGCCGGC CGTAAGGTCG GGGTGATCGG GCGCACGCCG
GCCAACGTCA AGCTGTTGCA CATCATCCTC GCCGAATCCG GCGTGTCGCC CGACAAGGTG
CAGACCGAGC AGTTCGCCGT CACGGCGATC GCCGAGATGG CGCGCGACGA GCAGCTGTCC
GCCTTTCTGT CGGTCGGCCC GCTCGACAGC AAGATCACGG CGGAGGCGAT CGCCGCCACC
GCGAAGGCGC GCGGCGAGCC GCGGTTTCTG CCGATCGACG TCGCCGATTC CATCGCCAAG
AAACATCCGA TCTACGATTC CGAGGAGATC CCCGGCAGCA CCTTCTCGTC CGCGCCGGCG
CGGCCCGAAG ACAAGGTCGA CACCGTCAGC ATCAACCACC TGATCATCGC CAAAAGTGCG
CTGTCGAGCC TCGATATCGC GCAGCTCACC CGGCAGATCT TCGCCGCGCG GCAGCAGCTC
GCGCGCGAAC TGCCGATCGC CGCCAAGATC GAGGCGCCCG ACACCGACAA GGCCGCCGCG
CTGCCGGCCC ATAGCGGCGC CGCCGCCTTC ATCGACGGCA CCGAGCGCAC CTTCATGGAG
CGCAACAGCG ACTACATCTG GGGGCTGGTC GTGCTGCTCT CCGGGCTCGG CTCGGCCGGC
GCGTGGTTTC GCTCCTACGT CACCCGCGAC GAGCGCGCCG CCGGCGCCAG GATGCGCGAC
CGCGCGCTCG CGCTTGTCGC AAAAGCCCGC AAGGCGCATT CGCTCGACGA GCTCGACGCC
ATGCAGCTCG AGATCGATCA CATCCTGCGC GACATGCTGG ACTGCTATGA CGACGGCGCG
ATCGACGATC TGGCGCCGTT CAACCTGGTG CTCGAGCAGT TTCACCACGC CGTCGCCGAC
CGGCGACAGA GTCTGACGAT CGCGAGCGGC GGAATAGCGC CGGCGCATCC GGATGCCCTC
GGCGTGCCGG GTGCATAG
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| Protein sequence | MVSSDGGGES LRKRRQRNRA RLRLATALTV IALVAGALGV LFYELRPVTL RIAVGPPGSD
DLKLIQALAQ TFVRDRSAVR LTPVTTDGAT PSLSAWREGR ADLAVTRGDL DLPTDAQAVA
ILRKNVVTLW ALPGRGKKPV AVKSIAELAG RKVGVIGRTP ANVKLLHIIL AESGVSPDKV
QTEQFAVTAI AEMARDEQLS AFLSVGPLDS KITAEAIAAT AKARGEPRFL PIDVADSIAK
KHPIYDSEEI PGSTFSSAPA RPEDKVDTVS INHLIIAKSA LSSLDIAQLT RQIFAARQQL
ARELPIAAKI EAPDTDKAAA LPAHSGAAAF IDGTERTFME RNSDYIWGLV VLLSGLGSAG
AWFRSYVTRD ERAAGARMRD RALALVAKAR KAHSLDELDA MQLEIDHILR DMLDCYDDGA
IDDLAPFNLV LEQFHHAVAD RRQSLTIASG GIAPAHPDAL GVPGA
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