| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0239 |
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| Symbol | |
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| ID | 5833294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 260483 |
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| End bp | 261844 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641366023 |
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| Product | TRAP-type uncharacterized transport system periplasmic component-like protein |
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| Protein accession | YP_001637735 |
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| Protein GI | 163849692 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.264256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTCGGT TGGGGCTTTC GAGTGTTCGC GAGGTATTTC TCCCCCTCGG CTTGGCGCTT
CTGCTCGTGC TCGGAGCCGT CGCGGCGTTC CATCTCACGC GTCCCACGAC CCTGACCATC
GCGGTCGCCC CCAATGGCGG CACCGAGCCG GCGCTGCTGC GGGCCTACGC CGACGAACTC
GCCCGGCGGA ACCTCGGCAT CCGGCTGAAG GTCGTATCCT TTGCCGGGGT GCGCGAGAGC
GCGGAGGCGT TGAAGGCCGG CAAGGCAGAC CTTGCGGTGG TTCGGCCGGA CGTGGCGATG
CCGGGCAACG GCCTGACCTT GGCGGTCCTG CGGACGCTCG CCGCCTTCGT CGCCGCGCCA
GGCGCCTCCG GCACCAAGGA CATCCCGGAT CTGGCGGGAA AACGACTGGG TATGCTCGCG
AGCCGGACTG CCGACCGGAC CCTGCTCCAC GACCTCGTCG GCCACTACGG GTTCGAACTC
CTGACCGATG CTCCGGCCGG GGCCGTGAAC ACCACCGCGG TGGTGCTGGT CCCGATTGAG
GAGGCCGATG TCGCAACGGC GCTCCGTGAC GGACGCATCG ACGCCATGGC TCTCGTGACG
ACGCCCAGTT CCCCGGCCGC GCGGCGGGTG GTCGCCCTGG TGGGCGAGGC GAGCGATGGT
GGTGACGTCG CGCTGATCGG TTTGCCCGAT ACCGCAGCGG TCCTGGCGCG GCGGCCGCGC
CTGCAGCCGG TGACGGTGCC GGCCGCCTTG TACGGCGGCA ATCCCCGCCT GCCGGCCGAG
GACGTCGCGA CCGTAGGCTC GTCCTACCGC CTGATGGCGC GGGCCGACCT GTCGCGGAGC
GTGGCCGCGG AGGTGACGCA GCACCTGTTC GAGATGCGCG CGGCCCTGGC CGAGACGGTC
CCCGCCGCGG AGGACGTCAG CCACCCGGAT TACGAGGACA CGGCCGACGC GACCAGCGCC
CGCCTGCCCA TTCATCCGGG CGCCCTCGAC TACTACGAGC GCGAGCAGGA GACCTTGATC
GAACGCTACG AGAGCTGGAT CTACCTCGTG GCCATCCTGG GGGGCGGCTT GGGCTCCACA
GCAGCTTGGC TTCGGCAGCG CATCGGGCGC CAGCGCCGCG AGCGGATCGA GGTCGCCACC
GCACGCCTGC TGGAACTGCG CTCCGAAGCC CGCCGCGAAA CCGACCGCGA GCGTCTGGAG
GCGATGGCAG GCGAGGTGGA TGACCTCGCG GCCAGTATCG CACGCCACGC CCTGAACAAG
CCAACCGAAC CGCGGACCTT GAGTGCTGCC ACCGTCGCCA TCGACGCGGC ACGCTCGACA
CTCAAGCGGG TACTCAGCGG TGCGGGTAGG CCCATCGGCT GA
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| Protein sequence | MRRLGLSSVR EVFLPLGLAL LLVLGAVAAF HLTRPTTLTI AVAPNGGTEP ALLRAYADEL
ARRNLGIRLK VVSFAGVRES AEALKAGKAD LAVVRPDVAM PGNGLTLAVL RTLAAFVAAP
GASGTKDIPD LAGKRLGMLA SRTADRTLLH DLVGHYGFEL LTDAPAGAVN TTAVVLVPIE
EADVATALRD GRIDAMALVT TPSSPAARRV VALVGEASDG GDVALIGLPD TAAVLARRPR
LQPVTVPAAL YGGNPRLPAE DVATVGSSYR LMARADLSRS VAAEVTQHLF EMRAALAETV
PAAEDVSHPD YEDTADATSA RLPIHPGALD YYEREQETLI ERYESWIYLV AILGGGLGST
AAWLRQRIGR QRRERIEVAT ARLLELRSEA RRETDRERLE AMAGEVDDLA ASIARHALNK
PTEPRTLSAA TVAIDAARST LKRVLSGAGR PIG
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