56 homologs were found in PanDaTox collection
for query gene Mpop_2259 on replicon NC_010725
Organism: Methylobacterium populi BJ001



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010172  Mext_2302  TRAP-type uncharacterized transport system periplasmic component-like protein  93.82 
 
 		 474 aa  847    Methylobacterium extorquens PA1  Bacteria  normal  0.172272  hitchhiker  0.00762339 
 
 
-
 
NC_011757  Mchl_2577  TRAP-type uncharacterized transport system periplasmic component-like protein  93.6 
 
 		 469 aa  845    Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.301233 
 
 
-
 
NC_010725  Mpop_2259  TRAP-type uncharacterized transport system periplasmic component-like protein  100 
 
 		 469 aa  924    Methylobacterium populi BJ001  Bacteria  normal  0.466386  normal  0.36502 
 
 
-
 
NC_010505  Mrad2831_3542  TRAP-type uncharacterized transport system periplasmic component-like protein  66.38 
 
 		 472 aa  577  1.0000000000000001e-163  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.919124 
 
 
-
 
NC_010511  M446_2036  TRAP-type uncharacterized transport system periplasmic component-like protein  59.35 
 
 		 463 aa  508  9.999999999999999e-143  Methylobacterium sp. 4-46  Bacteria  normal  1  hitchhiker  0.00372211 
 
 
-
 
NC_011894  Mnod_0519  TRAP-type uncharacterized transport system periplasmic component-like protein  61.4 
 
 		 463 aa  486  1e-136  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_5654  TRAP-type uncharacterized transport system periplasmic component-like protein  51.72 
 
 		 471 aa  398  1e-109  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_4219  TRAP-type uncharacterized transport system periplasmic component-like protein  50.61 
 
 		 465 aa  376  1e-103  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.340628 
 
 
-
 
NC_011894  Mnod_0107  TRAP-type uncharacterized transport system periplasmic component-like protein  49.05 
 
 		 453 aa  358  9.999999999999999e-98  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011757  Mchl_0184  TRAP-type uncharacterized transport system periplasmic component-like protein  46.38 
 
 		 453 aa  350  2e-95  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.864216  normal  0.611675 
 
 
-
 
NC_010172  Mext_0239  TRAP-type uncharacterized transport system periplasmic component-like protein  46.14 
 
 		 453 aa  349  7e-95  Methylobacterium extorquens PA1  Bacteria  normal  0.264256  normal  1 
 
 
-
 
NC_010511  M446_4743  TRAP-type uncharacterized transport system periplasmic component-like protein  47.14 
 
 		 457 aa  316  6e-85  Methylobacterium sp. 4-46  Bacteria  normal  0.704005  normal  1 
 
 
-
 
NC_011894  Mnod_0342  TRAP transporter solute receptor, TAXI family  35.7 
 
 		 423 aa  215  9.999999999999999e-55  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0450847  n/a   
 
 
-
 
NC_011666  Msil_3025  TRAP transporter solute receptor, TAXI family  34.17 
 
 		 441 aa  214  3.9999999999999995e-54  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010511  M446_2265  TRAP transporter solute receptor TAXI family protein  34.99 
 
 		 442 aa  204  2e-51  Methylobacterium sp. 4-46  Bacteria  normal  1  decreased coverage  0.00194673 
 
 
-
 
NC_011004  Rpal_0409  TRAP transporter solute receptor, TAXI family  31.13 
 
 		 462 aa  196  1e-48  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.309942  n/a   
 
 
-
 
NC_007778  RPB_0100  TRAP transporter solute receptor TAXI family protein  30.92 
 
 		 480 aa  188  2e-46  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007925  RPC_2525  TRAP transporter solute receptor TAXI family protein  29.33 
 
 		 486 aa  183  5.0000000000000004e-45  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.839724  normal  0.154925 
 
 
-
 
NC_010581  Bind_3430  TRAP transporter solute receptor TAXI family protein  32.21 
 
 		 461 aa  183  6e-45  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.199051 
 
 
-
 
NC_007958  RPD_0702  TRAP transporter solute receptor TAXI family protein  29.18 
 
 		 480 aa  177  4e-43  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.871087  normal  1 
 
 
-
 
NC_010581  Bind_0899  hypothetical protein  27.43 
 
 		 437 aa  175  9.999999999999999e-43  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.727607  normal  0.541745 
 
 
-
 
NC_009485  BBta_0249  hypothetical protein  27.08 
 
 		 448 aa  170  5e-41  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010581  Bind_2753  hypothetical protein  29.48 
 
 		 433 aa  166  6.9999999999999995e-40  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_1581  TRAP transporter solute receptor TAXI family protein  29.91 
 
 		 457 aa  166  1.0000000000000001e-39  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.193293 
 
 
-
 
NC_011666  Msil_2797  TRAP-type uncharacterized transport system periplasmic component-like protein  29.03 
 
 		 485 aa  161  2e-38  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_007298  Daro_2929  hypothetical protein  27.92 
 
 		 443 aa  157  4e-37  Dechloromonas aromatica RCB  Bacteria  normal  0.0484025  normal  1 
 
 
-
 
NC_011004  Rpal_2087  hypothetical protein  28.04 
 
 		 466 aa  156  7e-37  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.073016  n/a   
 
 
-
 
NC_011666  Msil_2760  TRAP transporter solute receptor, TAXI family  28.8 
 
 		 433 aa  155  2e-36  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010511  M446_1545  TRAP-type uncharacterized transport system periplasmic component-like protein  28.1 
 
 		 468 aa  148  2.0000000000000003e-34  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_1959  hypothetical protein  27.15 
 
 		 467 aa  147  3e-34  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_3495  hypothetical protein  26.27 
 
 		 465 aa  142  9e-33  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007964  Nham_0909  hypothetical protein  26.44 
 
 		 491 aa  141  1.9999999999999998e-32  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_5694  TRAP-type uncharacterized transport system periplasmic component-like protein  25.88 
 
 		 477 aa  132  1.0000000000000001e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_6537  hypothetical protein  24.27 
 
 		 467 aa  122  1.9999999999999998e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.866176  normal  1 
 
 
-
 
NC_011884  Cyan7425_4597  TRAP transporter solute receptor, TAXI family  22.89 
 
 		 454 aa  114  4.0000000000000004e-24  Cyanothece sp. PCC 7425  Bacteria  normal  0.244351  normal  1 
 
 
-
 
NC_010510  Mrad2831_5881  TRAP-type uncharacterized transport system periplasmic component-like protein  27.25 
 
 		 440 aa  100  5e-20  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.810377 
 
 
-
 
NC_011884  Cyan7425_4331  TRAP transporter solute receptor, TAXI family  23.7 
 
 		 453 aa  91.7  3e-17  Cyanothece sp. PCC 7425  Bacteria  normal  0.794472  normal  1 
 
 
-
 
NC_011729  PCC7424_4573  TRAP transporter solute receptor, TAXI family  21.21 
 
 		 446 aa  91.3  4e-17  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_011894  Mnod_3511  TRAP-type uncharacterized transport system periplasmic component-like protein  27.2 
 
 		 179 aa  69.7  0.0000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_2418  TRAP-type uncharacterized transport system periplasmic component-like protein  34.01 
 
 		 176 aa  62  0.00000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_009457  VC0395_A2848  immunogenic protein  21.36 
 
 		 328 aa  54.7  0.000003  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_013456  VEA_003379  immunogenic protein  21.66 
 
 		 323 aa  50.1  0.00009  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_2063  TRAP transporter solute receptor TAXI family protein  22.76 
 
 		 327 aa  50.1  0.00009  Marinobacter aquaeolei VT8  Bacteria  normal  0.800081  n/a   
 
 
-
 
NC_009783  VIBHAR_02419  hypothetical protein  22.09 
 
 		 323 aa  49.7  0.0001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011312  VSAL_I0356  hypothetical protein  21.67 
 
 		 324 aa  49.7  0.0001  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.097907  n/a   
 
 
-
 
NC_007298  Daro_0549  TRAP transporter solute receptor TAXI family protein  24.2 
 
 		 441 aa  49.3  0.0002  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.973361 
 
 
-
 
NC_008554  Sfum_3723  TRAP transporter solute receptor TAXI family protein  21.37 
 
 		 316 aa  48.5  0.0002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013173  Dbac_0033  TRAP transporter solute receptor, TAXI family  22.54 
 
 		 319 aa  47.4  0.0005  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_009783  VIBHAR_00793  hypothetical protein  20.81 
 
 		 322 aa  45.4  0.002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007643  Rru_A0608  TRAP transporter solute receptor TAXI family protein  23.85 
 
 		 326 aa  45.4  0.002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.516133  n/a   
 
 
-
 
NC_008700  Sama_1473  hypothetical protein  29.58 
 
 		 268 aa  45.4  0.002  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008025  Dgeo_1063  TRAP transporter solute receptor TAXI family protein  25.21 
 
 		 317 aa  44.7  0.003  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  0.745912 
 
 
-
 
NC_007493  RSP_1613  TRAP dicarboxylate family transporter DctP subunit  30.17 
 
 		 317 aa  44.7  0.004  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009049  Rsph17029_0267  TRAP transporter solute receptor TAXI family protein  30.17 
 
 		 317 aa  44.7  0.004  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.418804  normal  1 
 
 
-
 
NC_013456  VEA_001678  TRAP transporter solute receptor TAXI family precursor  20.5 
 
 		 322 aa  43.9  0.007  Vibrio sp. Ex25  Bacteria  normal  0.150837  n/a   
 
 
-
 
NC_009654  Mmwyl1_1764  TRAP transporter solute receptor TAXI family protein  20.06 
 
 		 323 aa  43.5  0.008  Marinomonas sp. MWYL1  Bacteria  normal  0.513988  normal  1 
 
 
-
 
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