| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0909 |
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| Symbol | |
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| ID | 4031343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 1002819 |
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| End bp | 1004294 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637969417 |
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| Product | hypothetical protein |
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| Protein accession | YP_576227 |
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| Protein GI | 92116498 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTATTCC TCGGATCAGA AGTCTTTTCG GTTATTCGCT TTAGCCCGGC AGCAACAATG
TCTGCATCAG ACGACGATCT CCGCGATCTC AAAGAGAACC GGCGCCGTAA ACGCCGGAAC
TCGCTGCTAC TGCTTCTCCT CGCCGGACTG CTGGTGTTCG CCGCCGCCAC GGGCGGACTG
TATTACGCCT TGCGGCCGGT CACGCTTCGG ATTGCGGTTG GTCCGCCCGG AAGCGACGAT
CAGAAGCTGA TCCAGGCGAT GGCGGAAACC TTCGACCGCG ACCGGAATGC AGTGAGGCTG
TCTCCCATCG TCACCGAGGG AGCGGCGCAA AGCTTGGCTC TTCTCGGCGC CTCCAATGCA
GATCTCGCGG TTGCGCGCGG CGATCTGGCC ATGCCCGGCG AAGCCGAAGC GGTCGTCATC
GTGCGCAACG ATGTGGTCGT GCTGTGGTGG CCTCCCGGTC TTCCTGGCAG AGTATCGAAA
AAAAGAAGGG CGCCGAAAAT TAAGGCCATC GACGAACTCG AGGGCCATCG GCTTGGCGTG
ATCGGCACGA CGCCGGCTAA TATCGCCTTG CTACGGATGA TCCTGACTGA ATCTGGCGTT
GCTCCTGACA AGGTCGCGGT AACGCAGTTC GGCACCGACC AGATCGAAAA GCTGGCGCGA
GACCCGAACC TCGACGCCTT TATGACGGTC GGCCCGGTGG GCAGCAAGAT CACCGCCGAC
GCGATTGCCG CGACGGCGCG CGCCAGAGGC GAGCCGAAAT TTCTCCCGAT CGACGTCTCG
GAAGCGATCG CCCTGAAGCA CCCACTCTAT GAATCCGAGG AAATTCCGGG CAGCGCCTTC
AATGCGAAGC CGGCATGGCC GGATGACAAG GTTGAAACAG TCGGCGCGAG TCACCTGATC
GTGGCACGAA AATCTTTGTC GGAGACCACA GTCGCCACCC TCACGCGGCA GGCGCTTGCT
GCGCGTCATA GGTTGGCGAG GGAAGTGCCG GGCGGCCCCC ACATCAAGAA GCCGGACACC
GACAAGGACG CAGCGCTGCC CGTGCATCGC GGAGCGGCGG CCTATATCGA TGGCACTGAA
CGCACCTTCC TGGACCGGTA CAGCGATTAC TTTTGGTTCG CTATCCTGCT TCTCTCCGGT
ATTGGCTCAG CCGGCGCTTG GTTGCGTCAA TATCTGAAGC GCGACGAGCG GGACGAAAGC
ACTGAACTCC GTAACAGGAT CATGACGATG ATCTCGAAGA TGAGCACCAC GCAATCCGTT
GAGGCATTGC TGGTGATGCG GCGCGATGTC GATGCTATCA TACGTGAAAC GCTCGAGTAC
CACGATGACG GCGCCATCGA CGAAGAAGAC CTTGCAGCCT TTGGACTAGT ACTCGAACTG
TTCGATCATG CAGTCGCCGA CCGCCGCGCA GCATTGGAAG CGGAGCCACC CGAACCGACC
CACCTGTGTC GAGCGCGAGC GGTCGTCGAA CATTAG
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| Protein sequence | MVFLGSEVFS VIRFSPAATM SASDDDLRDL KENRRRKRRN SLLLLLLAGL LVFAAATGGL
YYALRPVTLR IAVGPPGSDD QKLIQAMAET FDRDRNAVRL SPIVTEGAAQ SLALLGASNA
DLAVARGDLA MPGEAEAVVI VRNDVVVLWW PPGLPGRVSK KRRAPKIKAI DELEGHRLGV
IGTTPANIAL LRMILTESGV APDKVAVTQF GTDQIEKLAR DPNLDAFMTV GPVGSKITAD
AIAATARARG EPKFLPIDVS EAIALKHPLY ESEEIPGSAF NAKPAWPDDK VETVGASHLI
VARKSLSETT VATLTRQALA ARHRLAREVP GGPHIKKPDT DKDAALPVHR GAAAYIDGTE
RTFLDRYSDY FWFAILLLSG IGSAGAWLRQ YLKRDERDES TELRNRIMTM ISKMSTTQSV
EALLVMRRDV DAIIRETLEY HDDGAIDEED LAAFGLVLEL FDHAVADRRA ALEAEPPEPT
HLCRARAVVE H
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