| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3688 |
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| Symbol | |
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| ID | 5085548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009429 |
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| Strand | - |
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| Start bp | 582962 |
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| End bp | 583936 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640485245 |
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| Product | hypothetical protein |
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| Protein accession | YP_001169860 |
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| Protein GI | 146279702 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.269569 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAACAG GGAAACCTGC TCTGGCCGGT GCCCTTGCGG GGGCGCTCGC CATACTGGCG
GCGCCGGCCC TCGCCCAGGA GAATTTCATT TCGATCGGAA CGGGCGCGGT GACCGGCGTC
TATTATCCGA CCGGCGGCGC GATCTGCCGG ATGATGTCGC GCACGCGCGC CGAGCACGGG
ATCCGCTGCG CGGTCGAGAG CACGGGCGGC TCGGTCTATA ACGTCAACGC CGTCCGCTCG
GGCGAGCTCG AGTTCGGCGT GGCGCAGTCC GACGTGCAGT TCAAGGCCCT CGAGGGCGAG
GGCACCTTTG CCGAGCAGGG CGCCTATCCC GAACTGCGGT CGGTCTTCTC GCTGCACCCC
GAGCCCTTTA CCGTGGTGGC CCGCGCCGAT GCCGGGATTG CCAACTTCGA GGATCTCAAG
GGCAAGCGCG TCAATGTCGG CAACCCCGGT TCGGGGCAGC GCGACACGAT GGAAGTGCTG
ATGGGCGAGC TGGGCTGGAC GATGGGTGAC TTCACCCTGA CCTCCGAGCT GCAGGCGGGC
GAGCAGAGCC AGGCCCTGTG CGACAACAAC ATCGACGCGA TGGTCTATAC CGTGGGGCAC
CCCTCGGGCT CGATCCAGGA AGCCACGACG GCCTGCGAGG CGGTTCTGGT GAACGTGGCG
GGCGAGGCGG TGGACAAGCT CGTGGACGAG CATCCCTACT ACCGCAAGGC CACGATCCCC
GGCGGGATGT ATCGCGGCAA TGCCGAGGAC GTGCAGACCT TCGGCGTCGG CGCCACGCTC
ATCACCTCGG CCAATACGCC GGACGATGTG GTCTATGCGC TGGTCAAGGC GCTCTTCTCG
GACATCGAGC AGTTCCGCGG CCTCCATCCG GCCTTTGCCG AGCTTGATCC GGCCGAGATG
GTCAGCGACG GTCTCTCTGC CCCCCTCCAT CCGGGCGCCG AGAAGTACTT CCGCGAGGCG
GGCCTCATCC AATGA
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| Protein sequence | MRTGKPALAG ALAGALAILA APALAQENFI SIGTGAVTGV YYPTGGAICR MMSRTRAEHG
IRCAVESTGG SVYNVNAVRS GELEFGVAQS DVQFKALEGE GTFAEQGAYP ELRSVFSLHP
EPFTVVARAD AGIANFEDLK GKRVNVGNPG SGQRDTMEVL MGELGWTMGD FTLTSELQAG
EQSQALCDNN IDAMVYTVGH PSGSIQEATT ACEAVLVNVA GEAVDKLVDE HPYYRKATIP
GGMYRGNAED VQTFGVGATL ITSANTPDDV VYALVKALFS DIEQFRGLHP AFAELDPAEM
VSDGLSAPLH PGAEKYFREA GLIQ
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