| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2760 |
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| Symbol | |
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| ID | 7092213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 3038287 |
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| End bp | 3039588 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643466073 |
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| Product | TRAP transporter solute receptor, TAXI family |
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| Protein accession | YP_002363043 |
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| Protein GI | 217978896 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCA GCGCGGGCCT GCGACGGACA ATTGGCGTGC TTTGCCTCGC TTCGATCGTT
GGCCTCGCCG CGTGGGTCTG GCATTTTTAC TACCGCCCGG TCATTCTTAC CGTTGCGGTC
GGGCCGCCGA GCTTCGACGA CGCCGATTTG ATCGCCTCCA TGGCCCGGGC TCTGGCGGCC
GACGGCTCGC ATATCCGCCT TTCGATCGAA CAGACTCCCG GGCCGATTGA ATCGCTCGAG
CGGCTGAAAA AGGGGCAAGC GCAACTCGCC GTCATCCGAA ATTTGGGAGA CGTGCCGGAT
CGAGTCCGAT CGATCGCCAT CCTGCATAGC GATCCCATCG CAATCGTCGC GCCGAAATCG
GCAAAGATAG AGAACTTTCG CGAGTTGGCC GACAAGACAT TGGGGCTGGT CGGGCCGCCT
GGCTCCTATG CGAGGCTGAT GACGTGGATG CGGCAGCGCT ACCATGGCGA ATTCGCATCG
GTTGACATAC CGCCCGTGGT CGCCGAGATC GCGGCGGCCA TCAACGCAAA GAAGATCGAC
GCGCTGCTGT TCATTATTCC GACAACAAAG AGCGGCGCGC TATCGGAGCG GTGGGCCTCG
GTCCGAAGAC TCACTCGCAA GTCGATGAGC TTCGTGTCTA TCGATGACGC CGAAGCGATC
GAATCCGCCG CGCCCGAATT CGAGCAAGGC GAAATTTCAT CCGGCGCGTT CGGAGGGTCG
CCGCCGGTCC CGCCCGAAAA TGTGACGACC CTGCTCGTGA CGACCTATCT CGTCACCGAC
CAAAGCGTGC GCTCAGACAT CGCGACAGAA TTGACCCGTT TTATTTTCGA GAATCGGCAG
CGGTTTACCC CCGACGCGCC GGTCGCCGCG CTGATCAAGG CGGCGAGCAC CGACAAGGAC
GCAATCATCC CCGTACATAA AGGCGCGAAG GAGTTTTTCG ACGGCGAGGA ACAGACATTG
ATGGAACGTT ATGGCGACTG GCTCTACACG GGACCCATCA TCCTCGGCGC GCTTTATTCG
GCGCTGCTGG CGATCTGGCA CATGCTCAGG CCATCGCCGC CGGAGGCTCC ACTACTGGCG
AGCGTTCCCG AAATCTCCTA CAGCATCAAA AATGCAACAT CATTGGGCGA GCTTGACGCC
ATAAGCGCGC GGGTCGACGC CGCTATCGAA CGCATCTCGG CGGAGGCGCT CGACGGCAAG
CTGGAGGACA GCAAAGTCGG AGCCAATTCT CTCGTCATCG CGTATATCAA CAGGCTCGTG
CGAGAGAAGC GCGCCGAGCT TCAGAAAAGC GCCGGCGCTT GA
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| Protein sequence | MKFSAGLRRT IGVLCLASIV GLAAWVWHFY YRPVILTVAV GPPSFDDADL IASMARALAA
DGSHIRLSIE QTPGPIESLE RLKKGQAQLA VIRNLGDVPD RVRSIAILHS DPIAIVAPKS
AKIENFRELA DKTLGLVGPP GSYARLMTWM RQRYHGEFAS VDIPPVVAEI AAAINAKKID
ALLFIIPTTK SGALSERWAS VRRLTRKSMS FVSIDDAEAI ESAAPEFEQG EISSGAFGGS
PPVPPENVTT LLVTTYLVTD QSVRSDIATE LTRFIFENRQ RFTPDAPVAA LIKAASTDKD
AIIPVHKGAK EFFDGEEQTL MERYGDWLYT GPIILGALYS ALLAIWHMLR PSPPEAPLLA
SVPEISYSIK NATSLGELDA ISARVDAAIE RISAEALDGK LEDSKVGANS LVIAYINRLV
REKRAELQKS AGA
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