| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4331 |
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| Symbol | |
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| ID | 3912144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4915232 |
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| End bp | 4916179 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637886235 |
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| Product | TRAP transporter solute receptor TAXI family protein |
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| Protein accession | YP_487929 |
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| Protein GI | 86751433 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0888724 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCCA GATTTTTGGG TTTCGCCGCG GCTGCGGCCG TGCTCGTTTC GGCGCCGCAG
GCTCACGCCC AGCAGTTCGT CAACGTGCTG ACCGGCGGCA CGTCCGGCGT GTATTATCCG
CTCGGCGTCG CGATCGCGAA GATCTACGGC GACAAGATTC CGAACGTGAA GTCGCAGGTG
CAGGCCACCA AGGCGTCGGT CGAGAACCTC AATTTGCTGC AGCAGGGCCG CGGCGAGATC
GCCTTCACGC TCGGCGACTC GCTGAAAGCG GCGTGGGACG GCGATCCTGA GGCCGGCTTC
AAGGCCAAGC TCGACAAGCT GCGCGTGATC GGCGCGATCT ATCCGAACTA CATCCAGATC
GTCGCCACCG CGGAGTCGGG GATCAAGACG CTCGCCGACC TCAAGGGCAA GAGCCTGTCG
GTCGGCGCGC CGAAATCCGG CACCGAGCTG AATTCCCGCG CCATCCTCAA GGCCGCCGGG
ATGGATTACA AGGACATGGG CAAGATCGAA TATCTGCCGT TCGCCGAATC CGTCGACCTG
ATGAAGAACC GCCAGCTCGC CGCCACGCTG CAATCCGCAG GCCTCGGCGT CGCCTCGCTC
AAGGATCTCA GCAACTCCTC CGAGATCAAC GTGGTCTCGG TGCCGAAGGA CGTGGTCGAC
AAGATCGGCC CGCCGTTCGT CGCCGAAACG ATCCCGGCCG GCACCTACAA GGGCCAGGAC
AAGGACGTTC CGACCGCGGC GGTGATCAAC TATCTCGTCA CTTCGACCGC GGTGTCCGAC
GATCTCGCCT ATCAGATGAC CAAGCTGGTG TTCGACTCGC TGCCGGACCT CGCCAGCGCC
CACGCCGCCG GCAAGGGCAT CAAGCTCGAG ACCGCCGCGG CCGGCAGCCC GGTTCCGCTG
CACCCCGGCG CGATCAAGTA CTTCAAGGAA AAGGGCGTGC TGAAGTAA
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| Protein sequence | MKARFLGFAA AAAVLVSAPQ AHAQQFVNVL TGGTSGVYYP LGVAIAKIYG DKIPNVKSQV
QATKASVENL NLLQQGRGEI AFTLGDSLKA AWDGDPEAGF KAKLDKLRVI GAIYPNYIQI
VATAESGIKT LADLKGKSLS VGAPKSGTEL NSRAILKAAG MDYKDMGKIE YLPFAESVDL
MKNRQLAATL QSAGLGVASL KDLSNSSEIN VVSVPKDVVD KIGPPFVAET IPAGTYKGQD
KDVPTAAVIN YLVTSTAVSD DLAYQMTKLV FDSLPDLASA HAAGKGIKLE TAAAGSPVPL
HPGAIKYFKE KGVLK
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