| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0456 |
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| Symbol | |
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| ID | 1168331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 482440 |
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| End bp | 483396 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637342455 |
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| Product | immunogenic-related protein |
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| Protein accession | NP_716093 |
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| Protein GI | 24372051 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCA ATAAACGCTT TATCGCCGTA AGCGCCGCTC TCACCCTCTC ACTCAGTGCA
GCCACTATGG CGGCCGCGCC AGCCTTTATC AATATTTTGA CCGGTGGCAC CAGTGGTGTG
TATTACCCAA TTGGTGTGGC ACTGTCGCAA CTCTACGGTA CAGGGATTGA AGGCGCGAAG
ACCTCTGTGC AAGCGACTAA GGCCTCAGTT GAAAATCTTA ACTTACTCCA AGCGGGTCGT
GGTGAGCTGG CCTTAGCCTT AGGTGATTCA GTGGCTGCGG CCTATCAGGG CGATGCCGAT
GCAGGCTTTA AAAAACCGTT AGATAAGGTT CGTGTACTCG CGGCGGCTTA TCCTAACTAT
ATTCAAATTG TGGCGAGTAA AGAATCAGGT ATCAAAACCT TAGCCGATTT AAAAGGTAAA
CGTATCTCTG TTGGCGCACC TAAATCGGGC ACAGAACTCA ATGCTCGCGC CATCTTCAAA
GCGGCCGGTT TAAGCTATGA GGATATGGGC AAGGTAGAGT TTTTACCTTA CGCCGAATCC
GTTGAGCTGA TTAAAAACCG TCAGTTAGAT GCAACCTTAC AGTCCTCAGG CTTAGGTATG
GCTGCAATTC GCGATTTGGC AACGACTATG CCAATTAACT TTGTTGAAGT CCCCGAGGAT
GTCATCCTCA AAATTAATAA TCCAGCCTAC CAGCATGGGG TGATCCCCGC ATCGACCTAT
GAAGGTCAAA CTGCTGATGT CTCAACGGTT GCCATTCAAA ACCTATTTGT CACTCAAACG
GGTGTCTCAG ACGATTTAGC CTATCAAATG ACTAAACTGA TGTTTGAGCA TTTAGATCGT
CTCGGTAACG CACACTCAGC GGCGAAGGCC ATTCAATTAG ACAAGGCAAC CAAAAACCTG
CCAGCGCCGC TGCACCCTGG TGCGGAGCGT TATTTCAAAG AAGTTGGTGC ACTCTAA
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| Protein sequence | MKINKRFIAV SAALTLSLSA ATMAAAPAFI NILTGGTSGV YYPIGVALSQ LYGTGIEGAK
TSVQATKASV ENLNLLQAGR GELALALGDS VAAAYQGDAD AGFKKPLDKV RVLAAAYPNY
IQIVASKESG IKTLADLKGK RISVGAPKSG TELNARAIFK AAGLSYEDMG KVEFLPYAES
VELIKNRQLD ATLQSSGLGM AAIRDLATTM PINFVEVPED VILKINNPAY QHGVIPASTY
EGQTADVSTV AIQNLFVTQT GVSDDLAYQM TKLMFEHLDR LGNAHSAAKA IQLDKATKNL
PAPLHPGAER YFKEVGAL
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