45 homologs were found in PanDaTox collection
for query gene Bind_0899 on replicon NC_010581
Organism: Beijerinckia indica subsp. indica ATCC 9039



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010581  Bind_0899  hypothetical protein  100 
 
 		 437 aa  877    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.727607  normal  0.541745 
 
 
-
 
NC_011894  Mnod_5694  TRAP-type uncharacterized transport system periplasmic component-like protein  58.82 
 
 		 477 aa  475  1e-133  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_1545  TRAP-type uncharacterized transport system periplasmic component-like protein  57.53 
 
 		 468 aa  464  1e-129  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_2797  TRAP-type uncharacterized transport system periplasmic component-like protein  52.84 
 
 		 485 aa  416  9.999999999999999e-116  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_007298  Daro_2929  hypothetical protein  34.01 
 
 		 443 aa  231  2e-59  Dechloromonas aromatica RCB  Bacteria  normal  0.0484025  normal  1 
 
 
-
 
NC_011666  Msil_3025  TRAP transporter solute receptor, TAXI family  35.47 
 
 		 441 aa  218  2e-55  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010581  Bind_2753  hypothetical protein  32.86 
 
 		 433 aa  212  1e-53  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_3511  TRAP-type uncharacterized transport system periplasmic component-like protein  69.29 
 
 		 179 aa  209  7e-53  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010510  Mrad2831_5881  TRAP-type uncharacterized transport system periplasmic component-like protein  33.33 
 
 		 440 aa  200  3.9999999999999996e-50  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.810377 
 
 
-
 
NC_010511  M446_2265  TRAP transporter solute receptor TAXI family protein  34.5 
 
 		 442 aa  199  6e-50  Methylobacterium sp. 4-46  Bacteria  normal  1  decreased coverage  0.00194673 
 
 
-
 
NC_007925  RPC_2525  TRAP transporter solute receptor TAXI family protein  31.46 
 
 		 486 aa  189  5.999999999999999e-47  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.839724  normal  0.154925 
 
 
-
 
NC_007778  RPB_0100  TRAP transporter solute receptor TAXI family protein  30.25 
 
 		 480 aa  187  2e-46  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010581  Bind_3430  TRAP transporter solute receptor TAXI family protein  30.99 
 
 		 461 aa  187  3e-46  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.199051 
 
 
-
 
NC_011004  Rpal_0409  TRAP transporter solute receptor, TAXI family  30.07 
 
 		 462 aa  187  3e-46  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.309942  n/a   
 
 
-
 
NC_009485  BBta_0249  hypothetical protein  30.77 
 
 		 448 aa  186  8e-46  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_0702  TRAP transporter solute receptor TAXI family protein  29.4 
 
 		 480 aa  185  1.0000000000000001e-45  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.871087  normal  1 
 
 
-
 
NC_011894  Mnod_0342  TRAP transporter solute receptor, TAXI family  32.04 
 
 		 423 aa  185  1.0000000000000001e-45  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0450847  n/a   
 
 
-
 
NC_011004  Rpal_2087  hypothetical protein  30.39 
 
 		 466 aa  176  6e-43  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.073016  n/a   
 
 
-
 
NC_010725  Mpop_2259  TRAP-type uncharacterized transport system periplasmic component-like protein  27.43 
 
 		 469 aa  172  1e-41  Methylobacterium populi BJ001  Bacteria  normal  0.466386  normal  0.36502 
 
 
-
 
NC_010505  Mrad2831_3542  TRAP-type uncharacterized transport system periplasmic component-like protein  28.25 
 
 		 472 aa  168  1e-40  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.919124 
 
 
-
 
NC_010505  Mrad2831_5654  TRAP-type uncharacterized transport system periplasmic component-like protein  29.29 
 
 		 471 aa  168  2e-40  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_2036  TRAP-type uncharacterized transport system periplasmic component-like protein  29.46 
 
 		 463 aa  165  1.0000000000000001e-39  Methylobacterium sp. 4-46  Bacteria  normal  1  hitchhiker  0.00372211 
 
 
-
 
NC_010172  Mext_2302  TRAP-type uncharacterized transport system periplasmic component-like protein  26.32 
 
 		 474 aa  162  1e-38  Methylobacterium extorquens PA1  Bacteria  normal  0.172272  hitchhiker  0.00762339 
 
 
-
 
NC_011757  Mchl_2577  TRAP-type uncharacterized transport system periplasmic component-like protein  26.77 
 
 		 469 aa  162  1e-38  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.301233 
 
 
-
 
NC_007778  RPB_3495  hypothetical protein  28.31 
 
 		 465 aa  159  7e-38  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_4219  TRAP-type uncharacterized transport system periplasmic component-like protein  27.99 
 
 		 465 aa  157  3e-37  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.340628 
 
 
-
 
NC_007958  RPD_1959  hypothetical protein  29.36 
 
 		 467 aa  156  7e-37  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_0519  TRAP-type uncharacterized transport system periplasmic component-like protein  29.65 
 
 		 463 aa  155  1e-36  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_0107  TRAP-type uncharacterized transport system periplasmic component-like protein  28.06 
 
 		 453 aa  147  5e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_007964  Nham_0909  hypothetical protein  26.3 
 
 		 491 aa  142  1.9999999999999998e-32  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_2418  TRAP-type uncharacterized transport system periplasmic component-like protein  44.81 
 
 		 176 aa  133  7.999999999999999e-30  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011757  Mchl_0184  TRAP-type uncharacterized transport system periplasmic component-like protein  25.36 
 
 		 453 aa  132  1.0000000000000001e-29  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.864216  normal  0.611675 
 
 
-
 
NC_010172  Mext_0239  TRAP-type uncharacterized transport system periplasmic component-like protein  25.12 
 
 		 453 aa  130  3e-29  Methylobacterium extorquens PA1  Bacteria  normal  0.264256  normal  1 
 
 
-
 
NC_009485  BBta_6537  hypothetical protein  26.56 
 
 		 467 aa  129  7.000000000000001e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.866176  normal  1 
 
 
-
 
NC_010511  M446_1581  TRAP transporter solute receptor TAXI family protein  28.31 
 
 		 457 aa  127  6e-28  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.193293 
 
 
-
 
NC_011666  Msil_2760  TRAP transporter solute receptor, TAXI family  27.49 
 
 		 433 aa  115  1.0000000000000001e-24  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010511  M446_4743  TRAP-type uncharacterized transport system periplasmic component-like protein  25.12 
 
 		 457 aa  112  1.0000000000000001e-23  Methylobacterium sp. 4-46  Bacteria  normal  0.704005  normal  1 
 
 
-
 
NC_011884  Cyan7425_4597  TRAP transporter solute receptor, TAXI family  23.45 
 
 		 454 aa  102  1e-20  Cyanothece sp. PCC 7425  Bacteria  normal  0.244351  normal  1 
 
 
-
 
NC_011884  Cyan7425_4331  TRAP transporter solute receptor, TAXI family  22.4 
 
 		 453 aa  85.1  0.000000000000002  Cyanothece sp. PCC 7425  Bacteria  normal  0.794472  normal  1 
 
 
-
 
NC_011729  PCC7424_4573  TRAP transporter solute receptor, TAXI family  19.52 
 
 		 446 aa  61.6  0.00000003  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_013093  Amir_1445  TRAP transporter solute receptor, TAXI family  30.54 
 
 		 307 aa  57.4  0.0000006  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_011312  VSAL_I1229  putative immunogenic protein precursor  26.57 
 
 		 310 aa  51.2  0.00003  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.144519  n/a   
 
 
-
 
NC_010506  Swoo_0846  TRAP transporter solute receptor TAXI family protein  26.34 
 
 		 306 aa  44.3  0.005  Shewanella woodyi ATCC 51908  Bacteria  normal  0.391191  normal  1 
 
 
-
 
NC_008554  Sfum_3723  TRAP transporter solute receptor TAXI family protein  22.5 
 
 		 316 aa  43.5  0.008  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_0549  TRAP transporter solute receptor TAXI family protein  22.75 
 
 		 441 aa  43.1  0.009  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.973361 
 
 
-
 
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