| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3381 |
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| Symbol | |
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| ID | 5078003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3936082 |
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| End bp | 3937038 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640500581 |
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| Product | TRAP transporter solute receptor TAXI family protein |
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| Protein accession | YP_001184891 |
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| Protein GI | 146294467 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCA ACAAACATTT TGTCGCCATC GGTGCCGCAA TCACACTCTC TCTCAGTGCT
GCCACTATGG CCGCAGCCCC TGCATTTATC AACATACTCA CAGGTGGAAC CAGTGGTGTT
TACTATCCTA TTGGTGTGGC CTTATCTCAA CTCTATGGTA GTGGAATCGA AGGTGCTAAA
ACCTCTGTTC AGGCAACAAA AGCCTCTGTA GAAAATCTTA ATCTACTGCA ATCGGGTCGT
GGTGAATTAG CTTTTGCATT AGGTGACTCA GTGTCAGCCG CCTACCAAGG TGATGTTGAT
GCAGGCTTTA ATAAACCTTT AGATAAAATT AGAGTCATTG CCGCGGCTTA TCCTAATTAC
ATCCAAATTG TTGCCAATAA AGAATCGGGT ATTAAAACCT TAGCCGATTT AAAGGGTAAA
CGTATCTCCG TTGGCGCCCC TAAATCGGGG ACAGAACTCA ATGCCAGAGC CATTTTTAAG
GCTGCAGGAT TAAGTTACGC AGATATGGGG AAAGTTGAAT TTTTACCTTA TGCAGAATCC
GTTGAATTGA TCAAAAATCG TCAATTAGAT GCAACGCTAC AATCATCAGG TTTAGGTATG
GCGGCAATCC GCGATCTCGC CGCTACTATG CCTATCAACT TTGTCGAAAT TCCTGAGGAT
GTCGTACTCA ACATAAATAA TCCTGCCTAT CAACATGGTG TCATCCCCGC CTCAACCTAC
GAAGGTCAAA CGACGGATGT GTCTACCGTT GCGATAGAAA ATTTACTGGT TACCCATAAT
GGCGTCTCAG ATGATTTAGC CTATCAAATG ACTAAAATTA TGTTCACGAA TCTTGAACGT
CTCGGCAATG CACACTCCGC AGCCAAAACC ATTAACCTCG AAAATGCAAC GAAAAATCTA
CCCATTCCAC TACATCCTGG TGCTGAGCGT TATTACAAAG AAGTGGGCGC GCTCTAA
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| Protein sequence | MKINKHFVAI GAAITLSLSA ATMAAAPAFI NILTGGTSGV YYPIGVALSQ LYGSGIEGAK
TSVQATKASV ENLNLLQSGR GELAFALGDS VSAAYQGDVD AGFNKPLDKI RVIAAAYPNY
IQIVANKESG IKTLADLKGK RISVGAPKSG TELNARAIFK AAGLSYADMG KVEFLPYAES
VELIKNRQLD ATLQSSGLGM AAIRDLAATM PINFVEIPED VVLNINNPAY QHGVIPASTY
EGQTTDVSTV AIENLLVTHN GVSDDLAYQM TKIMFTNLER LGNAHSAAKT INLENATKNL
PIPLHPGAER YYKEVGAL
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