| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0267 |
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| Symbol | |
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| ID | 4895802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 291443 |
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| End bp | 292396 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640110850 |
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| Product | TRAP transporter solute receptor TAXI family protein |
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| Protein accession | YP_001042158 |
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| Protein GI | 126461044 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.418804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCGCC GCACAACCCT GTCCGCGGCC GCGGCCGCTG CCGTGCTGAG CCTTCAGCCG
CAAGTGGCCG CCGCGCAGGA GTTCATCAAC GTCCTGACCG GGGGCACCTC GGGCGTCTAC
TATCCGCTGG GCGTCGGCCT GTCGGAAATC TATGCCGAGA ACATCGAAGG CGCGCGCACC
CAGGTGCAGG CGACGAAGGC CTCGGTCGAG AACCTGAACC TGCTCGCGCA GCGCAAGGGC
GAACTGGCCT TCGCCCTGGG CGATTCGGTG ACGCTCGCCT GGGAAGGCAA CGAGGAGGCG
GGCTTCCCGC GCCCGCTGAA GAACCTGCGC GCCATCGCGG CCATCTATCC GAACTATATC
CAGATCGTGG CCGACGCGGC CTCGGGCGTC ACGACGCTCG AGGATCTGAA GGGCAAGACG
CTCTCGGTCG GCGCGCCGGC CTCGGGCACC GAGCTCAATG CCCGCGCCAT CTTCGGTGCG
GCGGGCATGA GCTACGAGGA TCTCGCCAAG GTCGAATACC TGCCCTACGC GGAATCGGCC
GAGCTCATCA AGAACCGGCA GCTGCAGGCG ACGCTGCAAT CCTCGGGTCT GGGCGTGGCC
TTCATCAAGG ACCTCTCCTC CACCCACGAC ATCAACCTCG TGAGCATCCC GGCCGAGGTG
GTCGAGAAGA TCGGCGCGCC CTATCAGCCC GCGGTGATCC CGGCCGGCAC CTATTCGGGG
CAGGATGCAG ACGTGCCCAC GGCGGCGGTG GGGAACCTTC TCGTGACGCA TGAGGATGTG
AGCGAGGAAA CCGCCTATCA GATGACGAAG CTGATGTTCG AGAACCTCGA CCGGCTGAAG
TCGGCCCATG CGGCGGCGGG CAACATCAAG CCCGAGACGG CCATCGAGGC GCTGCCGATC
CCGCTGCATC CGGGCGCGGA GAAATACTAC CGCGAGATCG GCCTGATCCA GTAA
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| Protein sequence | MFRRTTLSAA AAAAVLSLQP QVAAAQEFIN VLTGGTSGVY YPLGVGLSEI YAENIEGART
QVQATKASVE NLNLLAQRKG ELAFALGDSV TLAWEGNEEA GFPRPLKNLR AIAAIYPNYI
QIVADAASGV TTLEDLKGKT LSVGAPASGT ELNARAIFGA AGMSYEDLAK VEYLPYAESA
ELIKNRQLQA TLQSSGLGVA FIKDLSSTHD INLVSIPAEV VEKIGAPYQP AVIPAGTYSG
QDADVPTAAV GNLLVTHEDV SEETAYQMTK LMFENLDRLK SAHAAAGNIK PETAIEALPI
PLHPGAEKYY REIGLIQ
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