44 homologs were found in PanDaTox collection
for query gene Mrad2831_3542 on replicon NC_010505
Organism: Methylobacterium radiotolerans JCM 2831



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010505  Mrad2831_3542  TRAP-type uncharacterized transport system periplasmic component-like protein  100 
 
 		 472 aa  924    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.919124 
 
 
-
 
NC_010725  Mpop_2259  TRAP-type uncharacterized transport system periplasmic component-like protein  67.23 
 
 		 469 aa  606  9.999999999999999e-173  Methylobacterium populi BJ001  Bacteria  normal  0.466386  normal  0.36502 
 
 
-
 
NC_010172  Mext_2302  TRAP-type uncharacterized transport system periplasmic component-like protein  67.44 
 
 		 474 aa  598  1e-170  Methylobacterium extorquens PA1  Bacteria  normal  0.172272  hitchhiker  0.00762339 
 
 
-
 
NC_011757  Mchl_2577  TRAP-type uncharacterized transport system periplasmic component-like protein  67.23 
 
 		 469 aa  596  1e-169  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.301233 
 
 
-
 
NC_010511  M446_2036  TRAP-type uncharacterized transport system periplasmic component-like protein  62.98 
 
 		 463 aa  535  1e-151  Methylobacterium sp. 4-46  Bacteria  normal  1  hitchhiker  0.00372211 
 
 
-
 
NC_011894  Mnod_0519  TRAP-type uncharacterized transport system periplasmic component-like protein  63 
 
 		 463 aa  490  1e-137  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_5654  TRAP-type uncharacterized transport system periplasmic component-like protein  50.62 
 
 		 471 aa  389  1e-107  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_4219  TRAP-type uncharacterized transport system periplasmic component-like protein  51.07 
 
 		 465 aa  388  1e-106  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.340628 
 
 
-
 
NC_011757  Mchl_0184  TRAP-type uncharacterized transport system periplasmic component-like protein  45.95 
 
 		 453 aa  348  1e-94  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.864216  normal  0.611675 
 
 
-
 
NC_010172  Mext_0239  TRAP-type uncharacterized transport system periplasmic component-like protein  45.71 
 
 		 453 aa  348  2e-94  Methylobacterium extorquens PA1  Bacteria  normal  0.264256  normal  1 
 
 
-
 
NC_011894  Mnod_0107  TRAP-type uncharacterized transport system periplasmic component-like protein  44.67 
 
 		 453 aa  344  2e-93  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_4743  TRAP-type uncharacterized transport system periplasmic component-like protein  46.23 
 
 		 457 aa  306  6e-82  Methylobacterium sp. 4-46  Bacteria  normal  0.704005  normal  1 
 
 
-
 
NC_011004  Rpal_0409  TRAP transporter solute receptor, TAXI family  32.19 
 
 		 462 aa  205  1e-51  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.309942  n/a   
 
 
-
 
NC_011894  Mnod_0342  TRAP transporter solute receptor, TAXI family  35.84 
 
 		 423 aa  202  9.999999999999999e-51  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0450847  n/a   
 
 
-
 
NC_007958  RPD_0702  TRAP transporter solute receptor TAXI family protein  32.31 
 
 		 480 aa  199  7.999999999999999e-50  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.871087  normal  1 
 
 
-
 
NC_007925  RPC_2525  TRAP transporter solute receptor TAXI family protein  31.49 
 
 		 486 aa  194  2e-48  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.839724  normal  0.154925 
 
 
-
 
NC_007778  RPB_0100  TRAP transporter solute receptor TAXI family protein  32.1 
 
 		 480 aa  195  2e-48  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_2265  TRAP transporter solute receptor TAXI family protein  35.53 
 
 		 442 aa  194  3e-48  Methylobacterium sp. 4-46  Bacteria  normal  1  decreased coverage  0.00194673 
 
 
-
 
NC_011666  Msil_3025  TRAP transporter solute receptor, TAXI family  32.81 
 
 		 441 aa  184  3e-45  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_011666  Msil_2797  TRAP-type uncharacterized transport system periplasmic component-like protein  30.53 
 
 		 485 aa  178  2e-43  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010581  Bind_0899  hypothetical protein  29.16 
 
 		 437 aa  177  3e-43  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.727607  normal  0.541745 
 
 
-
 
NC_009485  BBta_0249  hypothetical protein  30.02 
 
 		 448 aa  177  3e-43  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010581  Bind_3430  TRAP transporter solute receptor TAXI family protein  29.87 
 
 		 461 aa  167  2.9999999999999998e-40  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.199051 
 
 
-
 
NC_011004  Rpal_2087  hypothetical protein  29.2 
 
 		 466 aa  160  3e-38  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.073016  n/a   
 
 
-
 
NC_007958  RPD_1959  hypothetical protein  29.44 
 
 		 467 aa  158  2e-37  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010581  Bind_2753  hypothetical protein  28.86 
 
 		 433 aa  156  9e-37  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_3495  hypothetical protein  28.86 
 
 		 465 aa  149  1.0000000000000001e-34  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_2760  TRAP transporter solute receptor, TAXI family  30 
 
 		 433 aa  148  2.0000000000000003e-34  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_007964  Nham_0909  hypothetical protein  28.73 
 
 		 491 aa  148  2.0000000000000003e-34  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_2929  hypothetical protein  26.73 
 
 		 443 aa  144  2e-33  Dechloromonas aromatica RCB  Bacteria  normal  0.0484025  normal  1 
 
 
-
 
NC_010511  M446_1581  TRAP transporter solute receptor TAXI family protein  29.73 
 
 		 457 aa  142  9.999999999999999e-33  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.193293 
 
 
-
 
NC_010511  M446_1545  TRAP-type uncharacterized transport system periplasmic component-like protein  28.44 
 
 		 468 aa  137  3.0000000000000003e-31  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009485  BBta_6537  hypothetical protein  25.91 
 
 		 467 aa  126  7e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.866176  normal  1 
 
 
-
 
NC_011894  Mnod_5694  TRAP-type uncharacterized transport system periplasmic component-like protein  26.54 
 
 		 477 aa  120  3.9999999999999996e-26  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_4597  TRAP transporter solute receptor, TAXI family  23.34 
 
 		 454 aa  110  4.0000000000000004e-23  Cyanothece sp. PCC 7425  Bacteria  normal  0.244351  normal  1 
 
 
-
 
NC_010510  Mrad2831_5881  TRAP-type uncharacterized transport system periplasmic component-like protein  26.98 
 
 		 440 aa  100  8e-20  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.810377 
 
 
-
 
NC_011884  Cyan7425_4331  TRAP transporter solute receptor, TAXI family  23.09 
 
 		 453 aa  94.4  4e-18  Cyanothece sp. PCC 7425  Bacteria  normal  0.794472  normal  1 
 
 
-
 
NC_011729  PCC7424_4573  TRAP transporter solute receptor, TAXI family  19.71 
 
 		 446 aa  90.1  7e-17  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_011894  Mnod_3511  TRAP-type uncharacterized transport system periplasmic component-like protein  28.57 
 
 		 179 aa  75.1  0.000000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_009457  VC0395_A2848  immunogenic protein  24.07 
 
 		 328 aa  53.1  0.00001  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_011312  VSAL_I0356  hypothetical protein  21.24 
 
 		 324 aa  48.1  0.0003  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.097907  n/a   
 
 
-
 
NC_011894  Mnod_2418  TRAP-type uncharacterized transport system periplasmic component-like protein  31.2 
 
 		 176 aa  46.2  0.001  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_007651  BTH_I1418  hypothetical protein  29.91 
 
 		 444 aa  43.9  0.006  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_010623  Bphy_3645  putative TRAP-type uncharacterized transport system, periplasmic component protein  25.59 
 
 		 451 aa  43.5  0.008  Burkholderia phymatum STM815  Bacteria  normal  0.746605  normal  1 
 
 
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