Gene Psyc_0746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0746 
Symbol 
ID3514246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp891023 
End bp892057 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content43% 
IMG OID637669434 
ProductTRAP-T family transporter periplasmic substrate binding subunit 
Protein accessionYP_264034 
Protein GI71065307 
COG category[R] General function prediction only 
COG ID[COG2358] TRAP-type uncharacterized transport system, periplasmic component 
TIGRFAM ID[TIGR02122] TRAP transporter solute receptor, TAXI family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.842378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCCA TTTATAAAAC GCCTTTACTT GCGGCAATGA TAGCAGCTAG TATGATGCTG 
GTTGCCTGTT CAGACAAAGC GGCTACTGAT AGCGCAGCTA CTGACAGTAC GGCTGCCGAT
GGCGCTGTTA CTGACACCGC TGCCACAGCA AATGACAAGC TTGAAACCAA ATTTGTTACT
ATCGCTACAG GCGGCGCGTC AGGTCCTTAT AATATTATCG GGACGTCTTT GGCAGAGATT
TATGCCAAAA CCTTTGGCGT CAACTCAAAG ACTCAAACGA CAGGCGCCTC AGTAGAAAAC
GTCAATCTGT TGACACAAGG TAAAGTTGAT ATGGTATTGG CCCTTAGTGA TGTGGTCACT
GATGCGGTTG AAGGTAAAAA TAACTTTGAT GCGCCAATCA CTAATATTCA ACAAATTGCC
GTATTGTATC CTAACGTAAT TCAGTTGGTT GCCACTCAAG ATTCTGGAAT CAAAAATATT
GAAGACTTAA AAGGCAAGCG TATTGCTGTT GGCGATCAAG GATCTGGCAC AGAAGTGAAT
GCTCGGACAT TACTAGAAGG GTTTGGCTTG ACTTATGATG ATGTCGAGGT GGATTATTTA
GGCTTTGCTG ATGCTGCAGA TGCGATGAAA GCTGGCAAAA TTGAGGCGGC ATTTTTTAGT
AGTGGCTTAC CAAACTCTTC ATTATTAGAG CTAGAGCAAG GCATTAAGTT GCAGTTGGTC
ACCATCAATC AAGATAAGCT TAAAAAAATT ATTGAGACCA AACCTTACTT TAAGACTTTT
GAGATTCCTG CCGGTACCTA TGGTAATGAT GCTGCTATTC CAACAACAGC TGTCATGAAC
GCCTTATTAG TGCGTTCTGA TATGTCTGAG GATGACGTTT ATAAACTGAC CAAAGCTTTA
TTTGATAATT TAGAAGGTTT GAAAAATGCC CACCAAGCGG CCGCTGATAT CAGTTTAGAG
ACGGCGCAGC AAGGTATGGT AGCGCCTATT CATCCAGGAG CCAAAAAATA CTATGATGAG
CAAGCAGCTA AATAA
 
Protein sequence
MKSIYKTPLL AAMIAASMML VACSDKAATD SAATDSTAAD GAVTDTAATA NDKLETKFVT 
IATGGASGPY NIIGTSLAEI YAKTFGVNSK TQTTGASVEN VNLLTQGKVD MVLALSDVVT
DAVEGKNNFD APITNIQQIA VLYPNVIQLV ATQDSGIKNI EDLKGKRIAV GDQGSGTEVN
ARTLLEGFGL TYDDVEVDYL GFADAADAMK AGKIEAAFFS SGLPNSSLLE LEQGIKLQLV
TINQDKLKKI IETKPYFKTF EIPAGTYGND AAIPTTAVMN ALLVRSDMSE DDVYKLTKAL
FDNLEGLKNA HQAAADISLE TAQQGMVAPI HPGAKKYYDE QAAK