Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0746 |
Symbol | |
ID | 3514246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 891023 |
End bp | 892057 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637669434 |
Product | TRAP-T family transporter periplasmic substrate binding subunit |
Protein accession | YP_264034 |
Protein GI | 71065307 |
COG category | [R] General function prediction only |
COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.842378 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTCCA TTTATAAAAC GCCTTTACTT GCGGCAATGA TAGCAGCTAG TATGATGCTG GTTGCCTGTT CAGACAAAGC GGCTACTGAT AGCGCAGCTA CTGACAGTAC GGCTGCCGAT GGCGCTGTTA CTGACACCGC TGCCACAGCA AATGACAAGC TTGAAACCAA ATTTGTTACT ATCGCTACAG GCGGCGCGTC AGGTCCTTAT AATATTATCG GGACGTCTTT GGCAGAGATT TATGCCAAAA CCTTTGGCGT CAACTCAAAG ACTCAAACGA CAGGCGCCTC AGTAGAAAAC GTCAATCTGT TGACACAAGG TAAAGTTGAT ATGGTATTGG CCCTTAGTGA TGTGGTCACT GATGCGGTTG AAGGTAAAAA TAACTTTGAT GCGCCAATCA CTAATATTCA ACAAATTGCC GTATTGTATC CTAACGTAAT TCAGTTGGTT GCCACTCAAG ATTCTGGAAT CAAAAATATT GAAGACTTAA AAGGCAAGCG TATTGCTGTT GGCGATCAAG GATCTGGCAC AGAAGTGAAT GCTCGGACAT TACTAGAAGG GTTTGGCTTG ACTTATGATG ATGTCGAGGT GGATTATTTA GGCTTTGCTG ATGCTGCAGA TGCGATGAAA GCTGGCAAAA TTGAGGCGGC ATTTTTTAGT AGTGGCTTAC CAAACTCTTC ATTATTAGAG CTAGAGCAAG GCATTAAGTT GCAGTTGGTC ACCATCAATC AAGATAAGCT TAAAAAAATT ATTGAGACCA AACCTTACTT TAAGACTTTT GAGATTCCTG CCGGTACCTA TGGTAATGAT GCTGCTATTC CAACAACAGC TGTCATGAAC GCCTTATTAG TGCGTTCTGA TATGTCTGAG GATGACGTTT ATAAACTGAC CAAAGCTTTA TTTGATAATT TAGAAGGTTT GAAAAATGCC CACCAAGCGG CCGCTGATAT CAGTTTAGAG ACGGCGCAGC AAGGTATGGT AGCGCCTATT CATCCAGGAG CCAAAAAATA CTATGATGAG CAAGCAGCTA AATAA
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Protein sequence | MKSIYKTPLL AAMIAASMML VACSDKAATD SAATDSTAAD GAVTDTAATA NDKLETKFVT IATGGASGPY NIIGTSLAEI YAKTFGVNSK TQTTGASVEN VNLLTQGKVD MVLALSDVVT DAVEGKNNFD APITNIQQIA VLYPNVIQLV ATQDSGIKNI EDLKGKRIAV GDQGSGTEVN ARTLLEGFGL TYDDVEVDYL GFADAADAMK AGKIEAAFFS SGLPNSSLLE LEQGIKLQLV TINQDKLKKI IETKPYFKTF EIPAGTYGND AAIPTTAVMN ALLVRSDMSE DDVYKLTKAL FDNLEGLKNA HQAAADISLE TAQQGMVAPI HPGAKKYYDE QAAK
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