Gene VSAL_I0356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0356 
Symbol 
ID6986443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp391308 
End bp392282 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content42% 
IMG OID643378735 
Producthypothetical protein 
Protein accessionYP_002261888 
Protein GI209693960 
COG category[R] General function prediction only 
COG ID[COG2358] TRAP-type uncharacterized transport system, periplasmic component 
TIGRFAM ID[TIGR02122] TRAP transporter solute receptor, TAXI family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.097907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTGA AAAACTTAAT TAAAGTAAGT GCTGTTGCAG CAGCAATGCT TGGTGCTGGC 
ATGGGAACCG CAAGCGCTCA AGAATTTATT ACAATTGGTA CTGGTTCTGT CACCGGTGTT
TACTACCCAA CGGGTGGTGC TATTTGTAAG TTAGTGAATA AAGATCGTAA AGAGCATAAT
GTTCGTTGTT CTGTTGAGTC CACTGGTGGT TCAATTTATA ACGTAAATAC TATCCGTTCT
GGTGAACTTG ATTTTGGTAT CGTGCAATCA GATTGGCAAT ACCATGGCTA TAACGGCACA
AGTAAATTTG AAGCTCAAGG TCCTTACAAG AAACTACGTG CAATGTTCTC TCTTCATACT
GAACCTTTTA ACATCATTGC TCGTTCTGAT TCCGGTATCA ACGACGTTTC TGATTTAGCC
GGAAAACGCG TTAACATTGG TAATCCAGGC TCTGGCGACC GTGCAACAAT GGGTGTTGTG
ATGAATGCGA TGGGCTGGAC AAACGACAGC TTTAAACTTG CATCGGAACT AAAAAGCTCT
GAGCTTTCAC AAGCGCTTTG TGATAATAAA ATTGATGCCT TCATCTACAT GGTTGGTCAT
CCAAATGGCT CAATCAAAGA AGCGACAACA TCGTGTGATG CTAAATTAGT TCCTGCTACT
GGTCCTAAGA TCGATAAGAT TGTTGCAGAT AACCCTTATT ACGCTTACAC AACCGTTCCT
GCTAGCATGT ACCGTGGAAC AGAAGGCGAT GTAAATAGCT TTGGTGTTGC GGCTACGGTG
GTTACGACAT CTGACGTATC AGATGAAGTG GCTTACAGTG TTGCAAAAGC AGTATTTGAA
AACTTTAATA CCTTCAAGCG TCTTCACCCT GCGTTTGCTA CGCTGAAAAA AGAAGACATG
GTTAAAGCGG GTATTTCTAT TCCATTGCAT CCTGGTGCGG TGAAATATTA CAAAGAAGTT
GGTCTACTAA AATAG
 
Protein sequence
MALKNLIKVS AVAAAMLGAG MGTASAQEFI TIGTGSVTGV YYPTGGAICK LVNKDRKEHN 
VRCSVESTGG SIYNVNTIRS GELDFGIVQS DWQYHGYNGT SKFEAQGPYK KLRAMFSLHT
EPFNIIARSD SGINDVSDLA GKRVNIGNPG SGDRATMGVV MNAMGWTNDS FKLASELKSS
ELSQALCDNK IDAFIYMVGH PNGSIKEATT SCDAKLVPAT GPKIDKIVAD NPYYAYTTVP
ASMYRGTEGD VNSFGVAATV VTTSDVSDEV AYSVAKAVFE NFNTFKRLHP AFATLKKEDM
VKAGISIPLH PGAVKYYKEV GLLK