Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1635 |
Symbol | |
ID | 3964164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 1766250 |
End bp | 1767209 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637916458 |
Product | TRAP transporter solute receptor TAXI family protein |
Protein accession | YP_522896 |
Protein GI | 89900425 |
COG category | [R] General function prediction only |
COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTTTA TCCGAAAACT CGGTCTTGCC CTGGGGCTTG GTGCCGCCAT CGCCAGCAGT TCTGCTTTGG CGCAGCAAGC ACAATTCATC ACCGTGCTGA CCGGCGGCAC CAGCGGGGTG TACTACCCGC TCGGCGTCTC CCTGTCACAG ATTTACGGCA AGGCCATTCC AGGCGCAAAG TCTTCAGTAC AGGCCACCAA GGCGTCCGCC GAAAACCTCA ACCTGCTCCA GGCAGGCCGC GGCGAAATCG CTTTTACCCT TGGCGATGCC CTCTCCGACG CCTGGAAAGG CAACGAGGAA GCTGGTTTCA AGGTGCCACT GAAAAAACTG CGTGGTGTCG CCGGTATCTA CTCCAACTAC ATCCAGATCG TCGCCAGCGC CGACTCGGGC ATCAAGACCC TGGCCGACCT GAAGGGCAAA CGCGTCGCCG TCGGCGCGCC GAAGTCTGGC ACCGAAATCA ATGCACGTGC CATCCTCAAG GGCGCCGGGC TAAGCTATAA AGACTTGGGC AAGGTCGAAT ACCTGCCGTT CGGCGAATCA GTCGAACTGA TGAAAAATCG CCAGATAGAC GCGACACTGA TCTCGGCGGG CCTTGGCGTC TCAGCCTTGC GTGACCTGGC GACCTCGGTG AAGATGATCG TCGTGCCGAT TCCCGCCGAC GTGGTGACCA AGATCAACGA CCCCGCCTAC ATTGCCGGCA CCATTCCGGC CAATACCTAC GAAGGACAGA CCGCGAGCGT GACCACCGTG GCGATCGAGA ATTTCATCGT TACCCATGAG AGCGTGCCGA CTGACACGGT CTACAAGATG ACCAAGGCCA TGTACGAAAA CCTCGATCAG ATGGTCGCTG CCCATACCGC GGCAAAAGCC ATCAGGCGCG AGGAAGGCCC CATGCATATG CCTCTTGCGC TGCACCCCGG TGCCGAGAAA TATTACCGCG AAGTCGGCCT GATCAAGTAA
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Protein sequence | MRFIRKLGLA LGLGAAIASS SALAQQAQFI TVLTGGTSGV YYPLGVSLSQ IYGKAIPGAK SSVQATKASA ENLNLLQAGR GEIAFTLGDA LSDAWKGNEE AGFKVPLKKL RGVAGIYSNY IQIVASADSG IKTLADLKGK RVAVGAPKSG TEINARAILK GAGLSYKDLG KVEYLPFGES VELMKNRQID ATLISAGLGV SALRDLATSV KMIVVPIPAD VVTKINDPAY IAGTIPANTY EGQTASVTTV AIENFIVTHE SVPTDTVYKM TKAMYENLDQ MVAAHTAAKA IRREEGPMHM PLALHPGAEK YYREVGLIK
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