Gene Rfer_1635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1635 
Symbol 
ID3964164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1766250 
End bp1767209 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content59% 
IMG OID637916458 
ProductTRAP transporter solute receptor TAXI family protein 
Protein accessionYP_522896 
Protein GI89900425 
COG category[R] General function prediction only 
COG ID[COG2358] TRAP-type uncharacterized transport system, periplasmic component 
TIGRFAM ID[TIGR02122] TRAP transporter solute receptor, TAXI family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTTA TCCGAAAACT CGGTCTTGCC CTGGGGCTTG GTGCCGCCAT CGCCAGCAGT 
TCTGCTTTGG CGCAGCAAGC ACAATTCATC ACCGTGCTGA CCGGCGGCAC CAGCGGGGTG
TACTACCCGC TCGGCGTCTC CCTGTCACAG ATTTACGGCA AGGCCATTCC AGGCGCAAAG
TCTTCAGTAC AGGCCACCAA GGCGTCCGCC GAAAACCTCA ACCTGCTCCA GGCAGGCCGC
GGCGAAATCG CTTTTACCCT TGGCGATGCC CTCTCCGACG CCTGGAAAGG CAACGAGGAA
GCTGGTTTCA AGGTGCCACT GAAAAAACTG CGTGGTGTCG CCGGTATCTA CTCCAACTAC
ATCCAGATCG TCGCCAGCGC CGACTCGGGC ATCAAGACCC TGGCCGACCT GAAGGGCAAA
CGCGTCGCCG TCGGCGCGCC GAAGTCTGGC ACCGAAATCA ATGCACGTGC CATCCTCAAG
GGCGCCGGGC TAAGCTATAA AGACTTGGGC AAGGTCGAAT ACCTGCCGTT CGGCGAATCA
GTCGAACTGA TGAAAAATCG CCAGATAGAC GCGACACTGA TCTCGGCGGG CCTTGGCGTC
TCAGCCTTGC GTGACCTGGC GACCTCGGTG AAGATGATCG TCGTGCCGAT TCCCGCCGAC
GTGGTGACCA AGATCAACGA CCCCGCCTAC ATTGCCGGCA CCATTCCGGC CAATACCTAC
GAAGGACAGA CCGCGAGCGT GACCACCGTG GCGATCGAGA ATTTCATCGT TACCCATGAG
AGCGTGCCGA CTGACACGGT CTACAAGATG ACCAAGGCCA TGTACGAAAA CCTCGATCAG
ATGGTCGCTG CCCATACCGC GGCAAAAGCC ATCAGGCGCG AGGAAGGCCC CATGCATATG
CCTCTTGCGC TGCACCCCGG TGCCGAGAAA TATTACCGCG AAGTCGGCCT GATCAAGTAA
 
Protein sequence
MRFIRKLGLA LGLGAAIASS SALAQQAQFI TVLTGGTSGV YYPLGVSLSQ IYGKAIPGAK 
SSVQATKASA ENLNLLQAGR GEIAFTLGDA LSDAWKGNEE AGFKVPLKKL RGVAGIYSNY
IQIVASADSG IKTLADLKGK RVAVGAPKSG TEINARAILK GAGLSYKDLG KVEYLPFGES
VELMKNRQID ATLISAGLGV SALRDLATSV KMIVVPIPAD VVTKINDPAY IAGTIPANTY
EGQTASVTTV AIENFIVTHE SVPTDTVYKM TKAMYENLDQ MVAAHTAAKA IRREEGPMHM
PLALHPGAEK YYREVGLIK