| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2848 |
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| Symbol | |
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| ID | 5136350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 3002238 |
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| End bp | 3003224 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640534292 |
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| Product | immunogenic protein |
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| Protein accession | YP_001218698 |
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| Protein GI | 147675744 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGAAG GGAAATTCAT GTCATTACCT AAAATAATCA AAATGGGTGC TATCGCAGCC
GCAGTTATCG GCTCTGGTGT CGCCAGCGCA CAGGATTTCA TTACTATCGG TACCGGTTCG
GTTACTGGTG TTTATTACCC TACGGGCGGC GCTATCTGTA AATTAGTGAA CAAGGATCGT
AAAGATCACA ACATTCGTTG TTCCGTTGAA TCGACTGGCG GCTCTATTTA CAACGTCAAC
ACTATCCGTT CTGGCGAATT GGATTTCGGT ATTGTGCAAT CAGATTGGCA GTACCATGGC
TACAACGGTA CGAGCGAATT TGCAGAACAA GGCCCATACA AAAAACTGCG CGCAGTATTC
TCAATGCACA CCGAGCCTTT CAATATCATC GCGCGTGCTG ATTCAGGCAT TGAAAACGTG
AAAGACCTCG CGGGCAAGCG CGTCAACATT GGTAACCCAG GCTCAGGCGA TCGCGCCACT
ATGCAAGTGG TGATGGATGC CTTCGGTTGG AATAACGACA GCTTTAAACT GGCGGCGGAG
CTCAAAGGTT CAGAGCGCTC ACAAGCGCTG TGTGACAACA AGATTGATGC CTTCATCTAC
ATGGTTGGCC ATCCAAATGG TGCCATCAAA GAAGCGACCA CCTCTTGTGC TGCCAAACTG
GTTCCCGCTA CGGGCCCTGA GATCGAAAAG ATCGTCGCCA ACAACCCTTA CTATGCATAC
AGCGTTGTAC CGGCTGGCAT GTACAGCGGC ACAGATCAAG AAGTGAAAAG CTTTGGTGTG
GCAGCAACGT TAGTCACCAC GGAAGAGGTG TCTGAAGCGG TCGTCTACAA CCTGACCAAA
GCGGTATTTG AAAACTTCGA TACCTTTACT CGCCTCCACC CAGCGTTTGC TAACTTGAAA
AAAGAAGACA TGGTAACCGC AGGGAACTCT ATCCCACTCC ACCCAGGTGC AGTGAAATAC
TACAAAGAAG CGGGTTTGAT TAAGTAA
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| Protein sequence | MKEGKFMSLP KIIKMGAIAA AVIGSGVASA QDFITIGTGS VTGVYYPTGG AICKLVNKDR
KDHNIRCSVE STGGSIYNVN TIRSGELDFG IVQSDWQYHG YNGTSEFAEQ GPYKKLRAVF
SMHTEPFNII ARADSGIENV KDLAGKRVNI GNPGSGDRAT MQVVMDAFGW NNDSFKLAAE
LKGSERSQAL CDNKIDAFIY MVGHPNGAIK EATTSCAAKL VPATGPEIEK IVANNPYYAY
SVVPAGMYSG TDQEVKSFGV AATLVTTEEV SEAVVYNLTK AVFENFDTFT RLHPAFANLK
KEDMVTAGNS IPLHPGAVKY YKEAGLIK
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