Gene VIBHAR_02419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02419 
Symbol 
ID5554340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp2430419 
End bp2431390 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content46% 
IMG OID640907905 
Producthypothetical protein 
Protein accessionYP_001445608 
Protein GI156974701 
COG category[R] General function prediction only 
COG ID[COG2358] TRAP-type uncharacterized transport system, periplasmic component 
TIGRFAM ID[TIGR02122] TRAP transporter solute receptor, TAXI family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAGC TCAAGCAAAT TGCTGTCGCG GCTTCTCTGG CTGCACTAAG TACAAGTTTT 
TCAGTTTCTG CTAAAGATAC GTTCGTGACC ATTGGTACGG GCGGTGTAAC TGGTGTGTAC 
TACCCAACGG GTGGTGCAAT TTGTCGTTTG GTAAATAAGT CACGTGCTGA CCATAACATT 
CGTTGTTCGG TAGAAAGTAC CGGTGGTTCT ATCTACAACA TCAATACTAT TCGCGCAGGT 
GAGCTAGACC TTGGTATCGC TCAGTCAGAC TGGCAGTACC ATGCTTACAA CGGTACGAGT 
AAGTTCGAAG ATAAAGGACC ATTCAAAGAG CTTCGTGCTG TGTTCTCCGT TCACCCGGAA 
CCGTTCACTG TTGTGGCTCG TAAAGATGCA AACATTAAAT CGTTTGATGA TTTGAAAGGT 
AAACGCGTTA ACATCGGTAA CCCTGGCTCT GGCCAACGCG GTACGATGGA AGTGCTAATG 
AAAGAGTACG GCTGGACGAA TGACGACTTC AAATTGGTGT CTGAGCTGAA AGCATCCGAG 
CAGTCTAAAG CGTTATGTGA TAACAAGATC GATGCGATGA TCTACACAGT AGGTCACCCA 
AGTGGTGCGA TTAAAGAAGC AACCACATCG TGTGACAGCA ACATCGTGAC TGTTGCAGGC 
AAGCAAGTAG ATAAACTTGT CGCAGACAAC AGCTTCTACC GCATTGCAAA TGTATCGGGT 
GGTATGTACC GCGGTTCTGA AAACGATGTA CAAACCTTTG GTGTAGGTGC GACGTTTGTT 
TCTTCAACGG CAGTGCCTGA TGAAGTGGTT TACAACGTAG TGAAAGCGGT ATTCGAAAAC 
TTTGACGACT TCCGCCGTCT ACACCCAGCA TTTGCCAACT TGAAGAAAGA AGAAATGGTG 
AGAGATGGTT TATCTGCGCC GCTTCACCCA GGTGCTGAGA AGTACTACAA AGAAGTGGGT 
TTGATTAAGT AA
 
Protein sequence
MLKLKQIAVA ASLAALSTSF SVSAKDTFVT IGTGGVTGVY YPTGGAICRL VNKSRADHNI 
RCSVESTGGS IYNINTIRAG ELDLGIAQSD WQYHAYNGTS KFEDKGPFKE LRAVFSVHPE 
PFTVVARKDA NIKSFDDLKG KRVNIGNPGS GQRGTMEVLM KEYGWTNDDF KLVSELKASE 
QSKALCDNKI DAMIYTVGHP SGAIKEATTS CDSNIVTVAG KQVDKLVADN SFYRIANVSG 
GMYRGSENDV QTFGVGATFV SSTAVPDEVV YNVVKAVFEN FDDFRRLHPA FANLKKEEMV 
RDGLSAPLHP GAEKYYKEVG LIK