| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2072 |
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| Symbol | |
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| ID | 4270458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 2349159 |
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| End bp | 2350112 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638126828 |
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| Product | TRAP transporter solute receptor TAXI family protein |
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| Protein accession | YP_742904 |
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| Protein GI | 114321221 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.169091 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCGAT CCAGCCTGCT TGCCCTGCTC GCGCTGCTGG CCGCCGGCCT GACCGCGCTG
CCCGCCCACG CCCGCGACCT GACCTTCGGC GGTGCCTCCA TCACCGGCGT CTACTATCAG
GTGGCCCAGC ACGGCTGCCG CCTGCTGGAG CAACACAAAC CGGAGTACAA CTGCGTGGGC
CGCCCCACCC AAGGCTCGGT GTTCAATATC AACGCCCTCT CTCAAGGCTC CATCGACTTT
GGCGTCGCCC AGTCCGACCG CGCCTGGCAG GCCATCAACG GCCAGGCCGA GTGGGAGCGC
CGGGGCGCCT TCGAAGGTCT GCGCAGCCTG TTCGCCATGC ACCCGGAGAC GGTCATGCTG
GTGGTACGGG CCGACAGCGA TATCCACGCC GTAGAGGACA TCACAGGCCA CACCATCAAC
GTCGGCAACC CCGGCTCCGG CCAGCGCCGT AACGCCATGG ACGTCCTGGA GATCTACGGC
ATCGACCCGC GCAGCGACAT CCGCGCCCGC AACCTGCAAC AGCACGAGGC CTCCCGCGCC
CTGGTCGATG GCCAGGTGGA CGGTTTCTTC TACACCGTGG GCAACCCCAG CGCCGCCATT
GAGGAGCCGG CCAACACGGT AGACATCCGC ATGATCCCGC TCGACTCAGA CGCCATCCGC
GCGTTCGTGG ACGAACGGCC CTACTACGTG ATGACCCGGA TACCCGCCGG CACCTACCCC
GGGGTGGACG AGGACATCGG GACTTATGCG GTCACCGCCA CCGTGGTCAC CCACGCCGAC
ATGGACGAGG CCGTGGCCTA CGACCTGACC GCCGCTGTCT TTGAACAGAT GGACGACCTG
CGCAACGCCC ACGCCGCCTT CCGCCATCTG GAGCCCGAGG CCATGATGGA GGGCGTCTCG
GTGGACCTCC ACCCCGGCGC CCTGCGCTAC TACGAAGAGC AGGGCTGGCG CTGA
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| Protein sequence | MRRSSLLALL ALLAAGLTAL PAHARDLTFG GASITGVYYQ VAQHGCRLLE QHKPEYNCVG
RPTQGSVFNI NALSQGSIDF GVAQSDRAWQ AINGQAEWER RGAFEGLRSL FAMHPETVML
VVRADSDIHA VEDITGHTIN VGNPGSGQRR NAMDVLEIYG IDPRSDIRAR NLQQHEASRA
LVDGQVDGFF YTVGNPSAAI EEPANTVDIR MIPLDSDAIR AFVDERPYYV MTRIPAGTYP
GVDEDIGTYA VTATVVTHAD MDEAVAYDLT AAVFEQMDDL RNAHAAFRHL EPEAMMEGVS
VDLHPGALRY YEEQGWR
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