More than 300 homologs were found in PanDaTox collection
for query gene Slin_0208 on replicon NC_013730
Organism: Spirosoma linguale DSM 74



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013730  Slin_0208  short-chain dehydrogenase/reductase SDR  100 
 
 
263 aa  539  9.999999999999999e-153  Spirosoma linguale DSM 74  Bacteria  normal  0.196422  normal 
 
 
-
 
NC_013037  Dfer_2713  short-chain dehydrogenase/reductase SDR  57.31 
 
 
266 aa  306  3e-82  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_0379  short-chain dehydrogenase/reductase SDR  49.21 
 
 
262 aa  252  5.000000000000001e-66  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_1684  short-chain dehydrogenase/reductase SDR  50.97 
 
 
263 aa  246  2e-64  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_6402  short-chain dehydrogenase/reductase SDR  40.15 
 
 
277 aa  191  1e-47  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.000182624  normal 
 
 
-
 
NC_009524  PsycPRwf_0093  short-chain dehydrogenase/reductase SDR  36.5 
 
 
266 aa  186  4e-46  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_007969  Pcryo_2430  short-chain dehydrogenase/reductase SDR  36.74 
 
 
274 aa  182  3e-45  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_2916  short-chain dehydrogenase/reductase SDR  41.18 
 
 
272 aa  166  4e-40  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.971691  n/a   
 
 
-
 
NC_013730  Slin_1686  short-chain dehydrogenase/reductase SDR  35.66 
 
 
269 aa  162  4.0000000000000004e-39  Spirosoma linguale DSM 74  Bacteria  normal  0.292744  normal 
 
 
-
 
NC_008048  Sala_0245  short-chain dehydrogenase/reductase SDR  39.76 
 
 
272 aa  159  3e-38  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.25903 
 
 
-
 
NC_013132  Cpin_4665  short-chain dehydrogenase/reductase SDR  36.55 
 
 
266 aa  158  1e-37  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.871012  hitchhiker  0.000000000383418 
 
 
-
 
NC_011693  PHATRDRAFT_16295  predicted protein  40.09 
 
 
237 aa  156  3e-37  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.0303319  n/a   
 
 
-
 
NC_011884  Cyan7425_1902  short chain dehydrogenase  36.82 
 
 
269 aa  150  2e-35  Cyanothece sp. PCC 7425  Bacteria  normal  0.0327948  normal 
 
 
-
 
NC_009052  Sbal_0416  short chain dehydrogenase  37.45 
 
 
267 aa  150  3e-35  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_4040  short chain dehydrogenase  37.45 
 
 
267 aa  150  3e-35  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3844  short chain dehydrogenase  37.45 
 
 
267 aa  150  3e-35  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000447473 
 
 
-
 
NC_007413  Ava_3968  short chain dehydrogenase  33.72 
 
 
269 aa  149  4e-35  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0231224  normal  0.018096 
 
 
-
 
NC_008577  Shewana3_0437  short chain dehydrogenase  36.72 
 
 
267 aa  149  6e-35  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3918  short chain dehydrogenase  37.45 
 
 
267 aa  148  8e-35  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0438  short chain dehydrogenase  37.11 
 
 
267 aa  147  1.0000000000000001e-34  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009901  Spea_0429  short chain dehydrogenase  35.77 
 
 
267 aa  147  1.0000000000000001e-34  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3588  short chain dehydrogenase  36.72 
 
 
267 aa  146  3e-34  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3735  short chain dehydrogenase  34.88 
 
 
281 aa  146  4.0000000000000006e-34  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0293  short chain dehydrogenase  34.77 
 
 
267 aa  145  6e-34  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0441  short chain dehydrogenase  36.33 
 
 
267 aa  144  1e-33  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_3027  short-chain dehydrogenase/reductase SDR  32.56 
 
 
272 aa  143  3e-33  Pedobacter heparinus DSM 2366  Bacteria  normal  hitchhiker  0.00333155 
 
 
-
 
NC_009438  Sputcn32_3404  short chain dehydrogenase  35.94 
 
 
267 aa  142  5e-33  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3415  short chain dehydrogenase  33.72 
 
 
268 aa  139  3.9999999999999997e-32  Shewanella loihica PV-4  Bacteria  normal  0.560569  normal 
 
 
-
 
NC_011679  PHATR_36881  2-deoxy-D-gluconate 3-dehydrogenase  33.96 
 
 
308 aa  139  6e-32  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.804236  n/a   
 
 
-
 
NC_008700  Sama_0389  short chain dehydrogenase  33.97 
 
 
270 aa  138  7.999999999999999e-32  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  35.66 
 
 
264 aa  137  2e-31  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  36.22 
 
 
264 aa  135  9e-31  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  36.22 
 
 
264 aa  135  9e-31  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  36.22 
 
 
264 aa  135  9e-31  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  35.8 
 
 
264 aa  134  9.999999999999999e-31  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  36.22 
 
 
264 aa  134  1.9999999999999998e-30  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_008463  PA14_12680  short chain dehydrogenase  34.62 
 
 
278 aa  134  1.9999999999999998e-30  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  35.77 
 
 
264 aa  133  3e-30  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  36.19 
 
 
264 aa  133  3e-30  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007347  Reut_A1414  short chain dehydrogenase  35.36 
 
 
270 aa  133  3e-30  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A4244  oxidoreductase, short-chain dehydrogenase/reductase family  35.8 
 
 
264 aa  132  6e-30  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0992  oxidoreductase, short-chain dehydrogenase/reductase family  35.8 
 
 
264 aa  132  7.999999999999999e-30  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3168  short chain dehydrogenase  35.48 
 
 
270 aa  128  9.000000000000001e-29  Polaromonas sp. JS666  Bacteria  normal  0.273274  normal  0.685188 
 
 
-
 
NC_009674  Bcer98_2831  short-chain dehydrogenase/reductase SDR  34.48 
 
 
264 aa  128  1.0000000000000001e-28  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_11068  oxidoreductase  39.79 
 
 
301 aa  127  2.0000000000000002e-28  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.205536 
 
 
-
 
NC_008726  Mvan_3101  short-chain dehydrogenase/reductase SDR  34.87 
 
 
280 aa  126  5e-28  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.300242  normal  0.231356 
 
 
-
 
NC_009972  Haur_0715  short-chain dehydrogenase/reductase SDR  33.33 
 
 
269 aa  124  1e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.965054  n/a   
 
 
-
 
NC_009338  Mflv_3370  short-chain dehydrogenase/reductase SDR  32.95 
 
 
285 aa  124  1e-27  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.976299 
 
 
-
 
NC_009668  Oant_2951  short chain dehydrogenase  32.69 
 
 
276 aa  124  2e-27  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_2356  short-chain dehydrogenase/reductase SDR  32.47 
 
 
282 aa  123  3e-27  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0998128  n/a   
 
 
-
 
NC_008009  Acid345_3255  short-chain dehydrogenase/reductase SDR  32.14 
 
 
262 aa  123  3e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.207826 
 
 
-
 
NC_012793  GWCH70_2271  short-chain dehydrogenase/reductase SDR  37.6 
 
 
262 aa  123  4e-27  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_2257  short-chain dehydrogenase/reductase SDR  32.57 
 
 
275 aa  122  5e-27  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.116431  n/a   
 
 
-
 
NC_009439  Pmen_2621  short-chain dehydrogenase/reductase SDR  32.84 
 
 
295 aa  122  5e-27  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.786359 
 
 
-
 
NC_010338  Caul_0159  short-chain dehydrogenase/reductase SDR  36.04 
 
 
249 aa  122  5e-27  Caulobacter sp. K31  Bacteria  normal  0.410897  normal  0.168063 
 
 
-
 
NC_013745  Htur_4636  short-chain dehydrogenase/reductase SDR  38.1 
 
 
254 aa  122  7e-27  Haloterrigena turkmenica DSM 5511  Archaea  normal  n/a   
 
 
-
 
NC_007796  Mhun_2368  short-chain dehydrogenase/reductase SDR  31.1 
 
 
274 aa  121  9.999999999999999e-27  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.448097 
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  30.12 
 
 
264 aa  120  1.9999999999999998e-26  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_013730  Slin_2186  short-chain dehydrogenase/reductase SDR  33.04 
 
 
248 aa  120  1.9999999999999998e-26  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.0361624 
 
 
-
 
NC_009943  Dole_1249  short-chain dehydrogenase/reductase SDR  34.33 
 
 
273 aa  120  1.9999999999999998e-26  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0626824  n/a   
 
 
-
 
NC_013411  GYMC61_0353  short-chain dehydrogenase/reductase SDR  35.52 
 
 
262 aa  120  1.9999999999999998e-26  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007953  Bxe_C0635  putative short-chain dehydrogenase/reductase  37.87 
 
 
246 aa  119  3e-26  Burkholderia xenovorans LB400  Bacteria  normal  0.660542  normal  0.0297002 
 
 
-
 
NC_009565  TBFG_13102  short-chain type dehydrogenase/reductase  35.68 
 
 
276 aa  120  3e-26  Mycobacterium tuberculosis F11  Bacteria  normal  0.432292  normal 
 
 
-
 
NC_008726  Mvan_3063  short-chain dehydrogenase/reductase SDR  33.47 
 
 
248 aa  119  3.9999999999999996e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.172179  normal  0.840489 
 
 
-
 
NC_008146  Mmcs_1552  short-chain dehydrogenase/reductase SDR  36.36 
 
 
246 aa  119  3.9999999999999996e-26  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1209  short-chain dehydrogenase/reductase SDR  34.3 
 
 
275 aa  119  3.9999999999999996e-26  Tsukamurella paurometabola DSM 20162  Bacteria  hitchhiker  0.00962961  n/a   
 
 
-
 
NC_008705  Mkms_1575  short-chain dehydrogenase/reductase SDR  36.36 
 
 
246 aa  119  3.9999999999999996e-26  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0808  short-chain dehydrogenase/reductase SDR  34.36 
 
 
252 aa  119  4.9999999999999996e-26  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_0796  short-chain dehydrogenase/reductase SDR  34.36 
 
 
281 aa  119  4.9999999999999996e-26  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.35999 
 
 
-
 
NC_002976  SERP2049  short chain dehydrogenase/reductase family oxidoreductase  34.39 
 
 
230 aa  119  6e-26  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II1472  short chain dehydrogenase  34.22 
 
 
315 aa  119  6e-26  Burkholderia thailandensis E264  Bacteria  normal  0.730562  n/a   
 
 
-
 
NC_008025  Dgeo_0458  short-chain dehydrogenase/reductase SDR  33.33 
 
 
257 aa  119  6e-26  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.706164 
 
 
-
 
NC_009675  Anae109_0032  short-chain dehydrogenase/reductase SDR  34.62 
 
 
342 aa  118  7.999999999999999e-26  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.891974  normal 
 
 
-
 
NC_007974  Rmet_5847  short-chain dehydrogenase/reductase SDR  34.6 
 
 
281 aa  118  9e-26  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11271  short-chain type dehydrogenase/reductase  31.11 
 
 
276 aa  118  9e-26  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000317139  hitchhiker  0.0033897 
 
 
-
 
NC_007348  Reut_B5157  Short-chain dehydrogenase/reductase SDR  32.06 
 
 
271 aa  118  9.999999999999999e-26  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2524  short chain dehydrogenase  34.22 
 
 
308 aa  117  9.999999999999999e-26  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0559  short-chain dehydrogenase/reductase SDR  34.22 
 
 
308 aa  117  9.999999999999999e-26  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0827865  n/a   
 
 
-
 
NC_009075  BURPS668_A1346  short chain dehydrogenase/reductase family oxidoreductase  34.22 
 
 
308 aa  117  9.999999999999999e-26  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1269  short chain dehydrogenase/reductase family oxidoreductase  34.22 
 
 
308 aa  117  9.999999999999999e-26  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1008  short chain dehydrogenase  34.22 
 
 
308 aa  117  9.999999999999999e-26  Burkholderia mallei NCTC 10247  Bacteria  normal  0.388516  n/a   
 
 
-
 
NC_012560  Avin_20190  Short-chain dehydrogenase/reductase SDR  33.71 
 
 
336 aa  117  3e-25  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_0488  short-chain dehydrogenase/reductase SDR  28.46 
 
 
261 aa  116  3e-25  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008312  Tery_3453  short-chain dehydrogenase/reductase SDR  30.22 
 
 
267 aa  117  3e-25  Trichodesmium erythraeum IMS101  Bacteria  normal  0.282255  normal 
 
 
-
 
NC_009632  SaurJH1_2555  short-chain dehydrogenase/reductase SDR  32.98 
 
 
231 aa  116  3e-25  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.459049  n/a   
 
 
-
 
NC_009487  SaurJH9_2505  short-chain dehydrogenase/reductase SDR  32.98 
 
 
231 aa  116  3e-25  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3989  short-chain dehydrogenase/reductase SDR  31.48 
 
 
276 aa  116  3.9999999999999997e-25  Mycobacterium sp. JLS  Bacteria  normal  0.171067  normal  0.181158 
 
 
-
 
NC_008146  Mmcs_3975  short-chain dehydrogenase/reductase SDR  31.48 
 
 
276 aa  116  3.9999999999999997e-25  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4049  short-chain dehydrogenase/reductase SDR  31.48 
 
 
276 aa  116  3.9999999999999997e-25  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3982  short-chain dehydrogenase/reductase SDR  39.59 
 
 
287 aa  115  6e-25  Burkholderia phymatum STM815  Bacteria  hitchhiker  0.000201148  normal 
 
 
-
 
NC_007760  Adeh_3205  short-chain dehydrogenase/reductase SDR  34.5 
 
 
244 aa  115  8.999999999999998e-25  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1880  short-chain dehydrogenase/reductase SDR  34.73 
 
 
276 aa  115  8.999999999999998e-25  Gordonia bronchialis DSM 43247  Bacteria  normal  0.138576  n/a   
 
 
-
 
NC_012793  GWCH70_1733  short chain dehydrogenase  36.87 
 
 
286 aa  114  1.0000000000000001e-24  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_4527  short-chain dehydrogenase/reductase SDR  32.2 
 
 
311 aa  114  1.0000000000000001e-24  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.207166 
 
 
-
 
NC_012028  Hlac_3251  short-chain dehydrogenase/reductase SDR  34.92 
 
 
259 aa  115  1.0000000000000001e-24  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
-
 
NC_009439  Pmen_1266  short-chain dehydrogenase/reductase SDR  32.31 
 
 
278 aa  115  1.0000000000000001e-24  Pseudomonas mendocina ymp  Bacteria  normal  0.343225  normal 
 
 
-
 
NC_009664  Krad_2573  short-chain dehydrogenase/reductase SDR  31.62 
 
 
246 aa  115  1.0000000000000001e-24  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_4381  short-chain dehydrogenase/reductase SDR  33.81 
 
 
248 aa  114  1.0000000000000001e-24  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.297747  hitchhiker  0.00314525 
 
 
-
 
NC_013525  Tter_0451  short-chain dehydrogenase/reductase SDR  36.96 
 
 
339 aa  114  2.0000000000000002e-24  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013501  Rmar_0194  short-chain dehydrogenase/reductase SDR  34.26 
 
 
233 aa  114  2.0000000000000002e-24  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
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