| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3063 |
|---|
| Symbol | |
|---|
| ID | 4643284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 3229678 |
|---|
| End bp | 3230424 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639806540 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_953871 |
|---|
| Protein GI | 120404042 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.172179 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.840489 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAACG ATCCGATCGA CGGCATGGTC GTCGCGATCA CCGGCGCCAG CAGCGGCATC
GGGGAGGCGA CGGCACGACT GCTCGGGACG CGCGGGGCGC GACTGGTGCT GGGCGCCCGG
CGCGCCGACC GCCTGCACAC CCTCGGCGGC GAGTTGCGCG CCGCCGGCGC CGAGGTGGCC
ACCGTGACGA CGGACGTCAC CGCGGCCGGG GACCTCGAGC GACTGGTGGG CACCGCGGTC
GCCGACTTCG GCAGGCTCGA CGTGCTGGTG TCCAACGCCG GCATCAGCGC GATCGGCCCG
CTCGCCGACG CCGACGTGAC CGGCTGGGAC GCGATGATCG ACGTGAACCT GCGCGGGGTG
CTGCACGGTA TCGCCGCCGC CATGCCCGTG TTCCGGCAGC AGGGGCACGG GCACTTCGTC
ACGACGGTGT CGACCGCCGG CCTGAAGATC GTCCCCACGA TGGGCGTGTA CGCGGCGACC
AAGAATGCCG TCCGCACCAT GATGGAGGCG TTGCGCCAGG AATCGACCGA TGGGGTCATC
CGAACCACGT CCATCTCGCC CGGATACGTC AACACCGAAC TCGACCGCTC GATCACCGAC
GTCGCCCTGC GCAACGCGGT CCGGGCCGAC ATGGACGCGT TCGGGCTGGC GCCGGAAGCG
GTGGCCCGCG CGATCGTCTT CGCGATCGAG CAGCCGCCCG AGGTGGAGAT CGGCGACCTG
ACGATCCGCC CCGCGGTCCA GGGCTGA
|
|---|
| Protein sequence | MVNDPIDGMV VAITGASSGI GEATARLLGT RGARLVLGAR RADRLHTLGG ELRAAGAEVA
TVTTDVTAAG DLERLVGTAV ADFGRLDVLV SNAGISAIGP LADADVTGWD AMIDVNLRGV
LHGIAAAMPV FRQQGHGHFV TTVSTAGLKI VPTMGVYAAT KNAVRTMMEA LRQESTDGVI
RTTSISPGYV NTELDRSITD VALRNAVRAD MDAFGLAPEA VARAIVFAIE QPPEVEIGDL
TIRPAVQG
|
|---|
| |