More than 300 homologs were found in PanDaTox collection
for query gene SO_0438 on replicon NC_004347
Organism: Shewanella oneidensis MR-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004347  SO_0438  short chain dehydrogenase  100 
 
 
267 aa  542  1e-153  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008322  Shewmr7_3588  short chain dehydrogenase  95.88 
 
 
267 aa  526  1e-148  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0441  short chain dehydrogenase  95.13 
 
 
267 aa  523  1e-147  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0437  short chain dehydrogenase  95.13 
 
 
267 aa  521  1e-147  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0416  short chain dehydrogenase  91.39 
 
 
267 aa  503  1e-141  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_4040  short chain dehydrogenase  91.39 
 
 
267 aa  503  1e-141  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3844  short chain dehydrogenase  91.39 
 
 
267 aa  503  1e-141  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000447473 
 
 
-
 
NC_009665  Shew185_3918  short chain dehydrogenase  91.01 
 
 
267 aa  501  1e-141  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3404  short chain dehydrogenase  88.39 
 
 
267 aa  493  9.999999999999999e-139  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0293  short chain dehydrogenase  71.05 
 
 
267 aa  411  1e-114  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_0429  short chain dehydrogenase  71.91 
 
 
267 aa  402  1e-111  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3415  short chain dehydrogenase  73.51 
 
 
268 aa  399  9.999999999999999e-111  Shewanella loihica PV-4  Bacteria  normal  0.560569  normal 
 
 
-
 
NC_008700  Sama_0389  short chain dehydrogenase  71 
 
 
270 aa  385  1e-106  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3968  short chain dehydrogenase  49.41 
 
 
269 aa  254  7e-67  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0231224  normal  0.018096 
 
 
-
 
NC_011884  Cyan7425_1902  short chain dehydrogenase  46.01 
 
 
269 aa  239  2.9999999999999997e-62  Cyanothece sp. PCC 7425  Bacteria  normal  0.0327948  normal 
 
 
-
 
NC_007948  Bpro_3168  short chain dehydrogenase  44.27 
 
 
270 aa  225  6e-58  Polaromonas sp. JS666  Bacteria  normal  0.273274  normal  0.685188 
 
 
-
 
NC_013730  Slin_1686  short-chain dehydrogenase/reductase SDR  40.53 
 
 
269 aa  202  3e-51  Spirosoma linguale DSM 74  Bacteria  normal  0.292744  normal 
 
 
-
 
NC_007347  Reut_A1414  short chain dehydrogenase  40.75 
 
 
270 aa  197  1.0000000000000001e-49  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_2951  short chain dehydrogenase  41 
 
 
276 aa  197  1.0000000000000001e-49  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_3027  short-chain dehydrogenase/reductase SDR  39.77 
 
 
272 aa  188  7e-47  Pedobacter heparinus DSM 2366  Bacteria  normal  hitchhiker  0.00333155 
 
 
-
 
NC_013132  Cpin_4665  short-chain dehydrogenase/reductase SDR  39.13 
 
 
266 aa  185  6e-46  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.871012  hitchhiker  0.000000000383418 
 
 
-
 
NC_011693  PHATRDRAFT_16295  predicted protein  43.48 
 
 
237 aa  178  7e-44  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.0303319  n/a   
 
 
-
 
NC_013037  Dfer_2713  short-chain dehydrogenase/reductase SDR  37.74 
 
 
266 aa  169  3e-41  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3735  short chain dehydrogenase  36.36 
 
 
281 aa  154  1e-36  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_12680  short chain dehydrogenase  36.86 
 
 
278 aa  150  3e-35  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_1684  short-chain dehydrogenase/reductase SDR  39.25 
 
 
263 aa  149  5e-35  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  35.66 
 
 
264 aa  148  1.0000000000000001e-34  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_0208  short-chain dehydrogenase/reductase SDR  37.11 
 
 
263 aa  147  1.0000000000000001e-34  Spirosoma linguale DSM 74  Bacteria  normal  0.196422  normal 
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  35.66 
 
 
264 aa  148  1.0000000000000001e-34  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  35.66 
 
 
264 aa  148  1.0000000000000001e-34  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  34.93 
 
 
264 aa  146  3e-34  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  34.93 
 
 
264 aa  146  3e-34  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013132  Cpin_6402  short-chain dehydrogenase/reductase SDR  33.85 
 
 
277 aa  146  4.0000000000000006e-34  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.000182624  normal 
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  35.29 
 
 
264 aa  145  8.000000000000001e-34  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  35.53 
 
 
264 aa  145  1e-33  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  35.66 
 
 
264 aa  144  1e-33  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_011725  BCB4264_A4244  oxidoreductase, short-chain dehydrogenase/reductase family  34.56 
 
 
264 aa  141  9.999999999999999e-33  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0992  oxidoreductase, short-chain dehydrogenase/reductase family  34.56 
 
 
264 aa  140  1.9999999999999998e-32  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_0379  short-chain dehydrogenase/reductase SDR  31.94 
 
 
262 aa  139  4.999999999999999e-32  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_1826  3-ketoacyl-(acyl-carrier-protein) reductase  37.29 
 
 
239 aa  137  2e-31  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_3000  short-chain dehydrogenase/reductase SDR  38.75 
 
 
241 aa  137  3.0000000000000003e-31  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A2065  3-ketoacyl-(acyl-carrier-protein) reductase  37.29 
 
 
239 aa  135  5e-31  Bacillus cereus AH187  Bacteria  hitchhiker  0.00000861938  n/a   
 
 
-
 
NC_011773  BCAH820_1995  3-ketoacyl-(acyl-carrier-protein) reductase  37.29 
 
 
239 aa  135  5e-31  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  5.591310000000001e-44 
 
 
-
 
NC_011725  BCB4264_A1964  3-ketoacyl-(acyl-carrier-protein) reductase  37.29 
 
 
239 aa  135  5e-31  Bacillus cereus B4264  Bacteria  normal  0.130885  n/a   
 
 
-
 
NC_011772  BCG9842_B3364  3-ketoacyl-(acyl-carrier-protein) reductase  37.29 
 
 
239 aa  135  5e-31  Bacillus cereus G9842  Bacteria  normal  0.115947  hitchhiker  0.00000000000000894376 
 
 
-
 
NC_003909  BCE_2044  3-ketoacyl-(acyl-carrier-protein) reductase  37.29 
 
 
242 aa  135  6.0000000000000005e-31  Bacillus cereus ATCC 10987  Bacteria  normal  0.252391  n/a   
 
 
-
 
NC_005945  BAS1819  3-ketoacyl-(acyl-carrier-protein) reductase  37.29 
 
 
242 aa  135  6.0000000000000005e-31  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1793  3-ketoacyl-(acyl-carrier-protein) reductase  37.29 
 
 
242 aa  135  6.0000000000000005e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.512815  n/a   
 
 
-
 
NC_006274  BCZK1775  3-ketoacyl-(acyl-carrier-protein) reductase  37.29 
 
 
242 aa  135  6.0000000000000005e-31  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1958  3-ketoacyl-(acyl-carrier-protein) reductase  37.29 
 
 
242 aa  135  6.0000000000000005e-31  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2831  short-chain dehydrogenase/reductase SDR  33.82 
 
 
264 aa  135  8e-31  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1494  3-ketoacyl-(acyl-carrier-protein) reductase  36.44 
 
 
239 aa  134  1.9999999999999998e-30  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.000128809  n/a   
 
 
-
 
NC_009441  Fjoh_5037  3-ketoacyl-(acyl-carrier-protein) reductase  32.91 
 
 
238 aa  131  1.0000000000000001e-29  Flavobacterium johnsoniae UW101  Bacteria  normal  0.293143  n/a   
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  32.58 
 
 
264 aa  130  3e-29  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_011729  PCC7424_0488  short-chain dehydrogenase/reductase SDR  37.37 
 
 
261 aa  129  4.0000000000000003e-29  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_010338  Caul_0159  short-chain dehydrogenase/reductase SDR  34.44 
 
 
249 aa  129  5.0000000000000004e-29  Caulobacter sp. K31  Bacteria  normal  0.410897  normal  0.168063 
 
 
-
 
NC_012793  GWCH70_1081  3-ketoacyl-(acyl-carrier-protein) reductase  37.24 
 
 
246 aa  127  1.0000000000000001e-28  Geobacillus sp. WCH70  Bacteria  normal  0.46401  n/a   
 
 
-
 
NC_007413  Ava_0943  Short-chain dehydrogenase/reductase SDR  37.82 
 
 
293 aa  127  2.0000000000000002e-28  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5847  short-chain dehydrogenase/reductase SDR  36.16 
 
 
281 aa  127  2.0000000000000002e-28  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_1067  short-chain dehydrogenase/reductase SDR  38.38 
 
 
258 aa  124  1e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0458  short-chain dehydrogenase/reductase SDR  42.05 
 
 
257 aa  125  1e-27  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.706164 
 
 
-
 
NC_010172  Mext_1014  short-chain dehydrogenase/reductase SDR  35.02 
 
 
336 aa  124  2e-27  Methylobacterium extorquens PA1  Bacteria  normal  0.264982  normal 
 
 
-
 
NC_008312  Tery_3453  short-chain dehydrogenase/reductase SDR  37.57 
 
 
267 aa  124  2e-27  Trichodesmium erythraeum IMS101  Bacteria  normal  0.282255  normal 
 
 
-
 
NC_009674  Bcer98_1043  acetoacetyl-CoA reductase  37.11 
 
 
247 aa  123  3e-27  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.8589  n/a   
 
 
-
 
NC_011679  PHATR_36881  2-deoxy-D-gluconate 3-dehydrogenase  32.2 
 
 
308 aa  123  3e-27  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.804236  n/a   
 
 
-
 
NC_013061  Phep_4049  3-ketoacyl-(acyl-carrier-protein) reductase  37.95 
 
 
238 aa  122  4e-27  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0762  short-chain dehydrogenase/reductase SDR  34.63 
 
 
336 aa  122  6e-27  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_007355  Mbar_A2512  3-oxoacyl-(acyl-carrier protein) reductase  35.42 
 
 
236 aa  121  9.999999999999999e-27  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0588198  normal  0.237046 
 
 
-
 
NC_010725  Mpop_1326  short-chain dehydrogenase/reductase SDR  35.02 
 
 
336 aa  121  9.999999999999999e-27  Methylobacterium populi BJ001  Bacteria  normal  0.945072  normal  0.131603 
 
 
-
 
NC_013132  Cpin_1337  3-ketoacyl-(acyl-carrier-protein) reductase  34.21 
 
 
238 aa  120  1.9999999999999998e-26  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.541378  normal 
 
 
-
 
NC_010515  Bcenmc03_3856  short-chain dehydrogenase/reductase SDR  38.38 
 
 
300 aa  120  1.9999999999999998e-26  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.514987 
 
 
-
 
NC_013730  Slin_3987  short-chain dehydrogenase/reductase SDR  40.1 
 
 
261 aa  120  3e-26  Spirosoma linguale DSM 74  Bacteria  normal  0.745234  normal  0.0404538 
 
 
-
 
NC_009943  Dole_2754  short-chain dehydrogenase/reductase SDR  33.08 
 
 
275 aa  120  3e-26  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.433019  n/a   
 
 
-
 
NC_013411  GYMC61_0353  short-chain dehydrogenase/reductase SDR  35.36 
 
 
262 aa  119  3.9999999999999996e-26  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009767  Rcas_3066  short-chain dehydrogenase/reductase SDR  33.84 
 
 
273 aa  119  4.9999999999999996e-26  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.172953  normal 
 
 
-
 
NC_010085  Nmar_1786  short-chain dehydrogenase/reductase SDR  35.71 
 
 
246 aa  119  6e-26  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_012793  GWCH70_2271  short-chain dehydrogenase/reductase SDR  30.53 
 
 
262 aa  119  6e-26  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1352  short-chain dehydrogenase/reductase SDR  32.68 
 
 
272 aa  119  7e-26  Roseiflexus sp. RS-1  Bacteria  normal  0.15703  normal 
 
 
-
 
NC_013743  Htur_2906  short-chain dehydrogenase/reductase SDR  37.89 
 
 
258 aa  118  7.999999999999999e-26  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013385  Adeg_0958  3-oxoacyl-(acyl-carrier-protein) reductase  38.69 
 
 
247 aa  118  9.999999999999999e-26  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2194  Short-chain dehydrogenase/reductase SDR  34.43 
 
 
255 aa  118  9.999999999999999e-26  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00000131904  normal  0.0140674 
 
 
-
 
NC_007614  Nmul_A1489  short chain dehydrogenase  31.8 
 
 
296 aa  118  9.999999999999999e-26  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1302  short-chain dehydrogenase/reductase SDR  34.73 
 
 
258 aa  117  9.999999999999999e-26  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.12307  hitchhiker  0.00977234 
 
 
-
 
NC_008009  Acid345_0265  3-oxoacyl-[acyl-carrier-protein] reductase  31.05 
 
 
248 aa  118  9.999999999999999e-26  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.534726  normal 
 
 
-
 
NC_008061  Bcen_4697  short-chain dehydrogenase/reductase SDR  37.88 
 
 
300 aa  118  9.999999999999999e-26  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.858083  n/a   
 
 
-
 
NC_008543  Bcen2424_3665  short-chain dehydrogenase/reductase SDR  37.88 
 
 
300 aa  118  9.999999999999999e-26  Burkholderia cenocepacia HI2424  Bacteria  normal  0.196954  normal 
 
 
-
 
NC_013730  Slin_2186  short-chain dehydrogenase/reductase SDR  33.85 
 
 
248 aa  117  1.9999999999999998e-25  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.0361624 
 
 
-
 
NC_010086  Bmul_5043  short-chain dehydrogenase/reductase SDR  37.88 
 
 
300 aa  117  1.9999999999999998e-25  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.680577 
 
 
-
 
NC_011884  Cyan7425_0579  short chain dehydrogenase  30.47 
 
 
336 aa  117  1.9999999999999998e-25  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0808  short-chain dehydrogenase/reductase SDR  34.8 
 
 
252 aa  117  1.9999999999999998e-25  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B2443  Short-chain dehydrogenase/reductase SDR  36.92 
 
 
300 aa  117  1.9999999999999998e-25  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_3758  short-chain dehydrogenase/reductase SDR  40.74 
 
 
299 aa  117  1.9999999999999998e-25  Sinorhizobium medicae WSM419  Bacteria  normal  0.297651  normal 
 
 
-
 
NC_013743  Htur_3538  short-chain dehydrogenase/reductase SDR  38.34 
 
 
248 aa  117  1.9999999999999998e-25  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_006349  BMAA0101  short chain dehydrogenase/reductase family oxidoreductase  37.95 
 
 
302 aa  117  3e-25  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1074  short chain dehydrogenase/reductase family oxidoreductase  37.95 
 
 
302 aa  116  3e-25  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_2848  3-ketoacyl-(acyl-carrier-protein) reductase  37.56 
 
 
246 aa  117  3e-25  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009079  BMA10247_A0120  short chain dehydrogenase/reductase family oxidoreductase  37.95 
 
 
302 aa  117  3e-25  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1262  short chain dehydrogenase/reductase family oxidoreductase  37.95 
 
 
302 aa  117  3e-25  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2673  short chain dehydrogenase/reductase family oxidoreductase  37.95 
 
 
302 aa  116  3e-25  Burkholderia pseudomallei 1106a  Bacteria  normal  0.181377  n/a   
 
 
-
 
NC_008340  Mlg_0994  3-ketoacyl-(acyl-carrier-protein) reductase  32.47 
 
 
247 aa  116  3e-25  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0983572  normal 
 
 
-
 
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