Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_2555 |
Symbol | |
ID | 5315218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | - |
Start bp | 2644398 |
End bp | 2645093 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640780666 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001317666 |
Protein GI | 150394991 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.459049 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAGTAT TAACAGATAA AATAGCAGTA GTTACAGGTG CAGGTAGTGG TATTGGAGAA GCAATTGCAA CATTACTACA TGAAGAAGGG GCGAAAGTTG TCTTAGCCGG TAGAAATAAA GATAAACTAC AAAATGTGGC GAATCAATTA GCTCAAGATA GTGTGAAGGT AGTGCCAACA GATGTAACGA ATAAAGAAGA AGTCGATGAA TTGATGAAAA TTGCACAACA AACATTCGGT GGTTTGGATA TTGTTATCAA TAGTGCGGGA CAAATGTTAT CGTCTAAGAT TACTGATTAT CAAGTAGATG AGTGGGATAG TATGATTGAT GTGAATATCA AAGGCACTTT ATATACGGCA CAGGCTGCAT TACCAACTAT GTTAGAACAA TCAAGTGGAC ATCTTATTAA CATTGCATCT ATTTCTGGCT TTGAAGTAAC GAAAAGTAGT ACGATTTATA GTGCGACGAA AGCAGCAGTT CACACTATTA CTCAAGGATT AGAAAAAGAG TTGGCAAAGA CAGGCGTTAA AGTAACAAGC ATTTCTCCAG GAATGGTAGA TACAGCAATA ACAGCCGCAT ATAATCCAAG TGATCGTAAA AAGCTTGATC CACAAGATAT TGCAGAAGCG GTATTGTATG CATTAACACA ACCAAAGCAT GTTAACGTGA ATGAAATTAC AGTGCGTCCT GTATAA
|
Protein sequence | MTVLTDKIAV VTGAGSGIGE AIATLLHEEG AKVVLAGRNK DKLQNVANQL AQDSVKVVPT DVTNKEEVDE LMKIAQQTFG GLDIVINSAG QMLSSKITDY QVDEWDSMID VNIKGTLYTA QAALPTMLEQ SSGHLINIAS ISGFEVTKSS TIYSATKAAV HTITQGLEKE LAKTGVKVTS ISPGMVDTAI TAAYNPSDRK KLDPQDIAEA VLYALTQPKH VNVNEITVRP V
|
| |