More than 300 homologs were found in PanDaTox collection
for query gene Phep_0379 on replicon NC_013061
Organism: Pedobacter heparinus DSM 2366



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013061  Phep_0379  short-chain dehydrogenase/reductase SDR  100 
 
 
262 aa  544  1e-154  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_2713  short-chain dehydrogenase/reductase SDR  49.6 
 
 
266 aa  263  2e-69  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_0208  short-chain dehydrogenase/reductase SDR  49.21 
 
 
263 aa  252  5.000000000000001e-66  Spirosoma linguale DSM 74  Bacteria  normal  0.196422  normal 
 
 
-
 
NC_010571  Oter_1684  short-chain dehydrogenase/reductase SDR  46.72 
 
 
263 aa  248  6e-65  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_009524  PsycPRwf_0093  short-chain dehydrogenase/reductase SDR  42.91 
 
 
266 aa  224  8e-58  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_007969  Pcryo_2430  short-chain dehydrogenase/reductase SDR  40.38 
 
 
274 aa  206  3e-52  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_6402  short-chain dehydrogenase/reductase SDR  40.77 
 
 
277 aa  194  1e-48  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.000182624  normal 
 
 
-
 
NC_008048  Sala_0245  short-chain dehydrogenase/reductase SDR  41.37 
 
 
272 aa  182  5.0000000000000004e-45  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.25903 
 
 
-
 
NC_007794  Saro_2916  short-chain dehydrogenase/reductase SDR  41.56 
 
 
272 aa  172  3.9999999999999995e-42  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.971691  n/a   
 
 
-
 
NC_013730  Slin_1686  short-chain dehydrogenase/reductase SDR  34.54 
 
 
269 aa  164  2.0000000000000002e-39  Spirosoma linguale DSM 74  Bacteria  normal  0.292744  normal 
 
 
-
 
NC_007413  Ava_3968  short chain dehydrogenase  34.78 
 
 
269 aa  152  8e-36  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0231224  normal  0.018096 
 
 
-
 
NC_009052  Sbal_0416  short chain dehydrogenase  32.32 
 
 
267 aa  147  2.0000000000000003e-34  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_4040  short chain dehydrogenase  32.32 
 
 
267 aa  147  2.0000000000000003e-34  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3844  short chain dehydrogenase  32.32 
 
 
267 aa  147  2.0000000000000003e-34  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000447473 
 
 
-
 
NC_009665  Shew185_3918  short chain dehydrogenase  32.32 
 
 
267 aa  146  4.0000000000000006e-34  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3415  short chain dehydrogenase  30.27 
 
 
268 aa  143  2e-33  Shewanella loihica PV-4  Bacteria  normal  0.560569  normal 
 
 
-
 
NC_011693  PHATRDRAFT_16295  predicted protein  36.52 
 
 
237 aa  143  3e-33  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.0303319  n/a   
 
 
-
 
NC_009438  Sputcn32_3404  short chain dehydrogenase  32.32 
 
 
267 aa  141  9.999999999999999e-33  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_3027  short-chain dehydrogenase/reductase SDR  31.33 
 
 
272 aa  141  9.999999999999999e-33  Pedobacter heparinus DSM 2366  Bacteria  normal  hitchhiker  0.00333155 
 
 
-
 
NC_013132  Cpin_4665  short-chain dehydrogenase/reductase SDR  33.06 
 
 
266 aa  139  3.9999999999999997e-32  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.871012  hitchhiker  0.000000000383418 
 
 
-
 
NC_008321  Shewmr4_0441  short chain dehydrogenase  31.18 
 
 
267 aa  139  3.9999999999999997e-32  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0437  short chain dehydrogenase  30.8 
 
 
267 aa  139  3.9999999999999997e-32  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0438  short chain dehydrogenase  31.94 
 
 
267 aa  139  4.999999999999999e-32  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_3735  short chain dehydrogenase  32.28 
 
 
281 aa  139  4.999999999999999e-32  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0293  short chain dehydrogenase  30.8 
 
 
267 aa  137  1e-31  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_0429  short chain dehydrogenase  32.82 
 
 
267 aa  137  2e-31  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3588  short chain dehydrogenase  30.8 
 
 
267 aa  137  2e-31  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_12680  short chain dehydrogenase  31.92 
 
 
278 aa  137  2e-31  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_011679  PHATR_36881  2-deoxy-D-gluconate 3-dehydrogenase  30.42 
 
 
308 aa  135  5e-31  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.804236  n/a   
 
 
-
 
NC_011884  Cyan7425_1902  short chain dehydrogenase  35.08 
 
 
269 aa  134  9.999999999999999e-31  Cyanothece sp. PCC 7425  Bacteria  normal  0.0327948  normal 
 
 
-
 
NC_008700  Sama_0389  short chain dehydrogenase  29.8 
 
 
270 aa  133  3e-30  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5847  short-chain dehydrogenase/reductase SDR  31.82 
 
 
281 aa  127  2.0000000000000002e-28  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3168  short chain dehydrogenase  31.5 
 
 
270 aa  126  3e-28  Polaromonas sp. JS666  Bacteria  normal  0.273274  normal  0.685188 
 
 
-
 
NC_009439  Pmen_2621  short-chain dehydrogenase/reductase SDR  33.33 
 
 
295 aa  126  3e-28  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.786359 
 
 
-
 
NC_007347  Reut_A1414  short chain dehydrogenase  30.98 
 
 
270 aa  123  3e-27  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_5037  3-ketoacyl-(acyl-carrier-protein) reductase  37.5 
 
 
238 aa  121  9.999999999999999e-27  Flavobacterium johnsoniae UW101  Bacteria  normal  0.293143  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  32.56 
 
 
264 aa  120  1.9999999999999998e-26  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_011663  Sbal223_2175  short chain dehydrogenase  31.09 
 
 
272 aa  120  3e-26  Shewanella baltica OS223  Bacteria  normal  0.328635  hitchhiker  0.00607004 
 
 
-
 
NC_009719  Plav_0391  short-chain dehydrogenase/reductase SDR  30.08 
 
 
279 aa  118  7.999999999999999e-26  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.319463  normal 
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  32.56 
 
 
264 aa  118  9e-26  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2831  short-chain dehydrogenase/reductase SDR  33.33 
 
 
264 aa  118  9.999999999999999e-26  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  32.17 
 
 
264 aa  117  1.9999999999999998e-25  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  32.17 
 
 
264 aa  117  1.9999999999999998e-25  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  32.17 
 
 
264 aa  117  1.9999999999999998e-25  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  32.17 
 
 
264 aa  116  3e-25  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_009943  Dole_2754  short-chain dehydrogenase/reductase SDR  30.97 
 
 
275 aa  116  3.9999999999999997e-25  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.433019  n/a   
 
 
-
 
NC_009565  TBFG_13102  short-chain type dehydrogenase/reductase  34.17 
 
 
276 aa  116  3.9999999999999997e-25  Mycobacterium tuberculosis F11  Bacteria  normal  0.432292  normal 
 
 
-
 
NC_009668  Oant_2951  short chain dehydrogenase  33.08 
 
 
276 aa  116  3.9999999999999997e-25  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  32.17 
 
 
264 aa  115  5e-25  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  32.17 
 
 
264 aa  115  6.9999999999999995e-25  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_2257  short-chain dehydrogenase/reductase SDR  28.9 
 
 
275 aa  115  7.999999999999999e-25  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.116431  n/a   
 
 
-
 
NC_011772  BCG9842_B0992  oxidoreductase, short-chain dehydrogenase/reductase family  31.78 
 
 
264 aa  114  1.0000000000000001e-24  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_44570  putative short-chain dehydrogenase  29.81 
 
 
295 aa  114  1.0000000000000001e-24  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.30545 
 
 
-
 
NC_011884  Cyan7425_3307  short-chain dehydrogenase/reductase SDR  30.04 
 
 
275 aa  115  1.0000000000000001e-24  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_2060  short chain dehydrogenase  30.04 
 
 
270 aa  114  2.0000000000000002e-24  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_4067  oxidoreductase, short-chain dehydrogenase/reductase family  32.02 
 
 
298 aa  114  2.0000000000000002e-24  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.122191  n/a   
 
 
-
 
NC_009565  TBFG_11271  short-chain type dehydrogenase/reductase  30 
 
 
276 aa  114  2.0000000000000002e-24  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000317139  hitchhiker  0.0033897 
 
 
-
 
NC_008009  Acid345_0265  3-oxoacyl-[acyl-carrier-protein] reductase  33.68 
 
 
248 aa  113  3e-24  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.534726  normal 
 
 
-
 
NC_013421  Pecwa_2367  short-chain dehydrogenase/reductase SDR  32.63 
 
 
268 aa  113  3e-24  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A4244  oxidoreductase, short-chain dehydrogenase/reductase family  31.78 
 
 
264 aa  113  3e-24  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_2383  short-chain dehydrogenase/reductase SDR  30.04 
 
 
274 aa  113  4.0000000000000004e-24  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_1733  short chain dehydrogenase  29.71 
 
 
286 aa  113  4.0000000000000004e-24  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_2434  short-chain dehydrogenase/reductase SDR  30.04 
 
 
274 aa  113  4.0000000000000004e-24  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II1472  short chain dehydrogenase  29.92 
 
 
315 aa  112  5e-24  Burkholderia thailandensis E264  Bacteria  normal  0.730562  n/a   
 
 
-
 
NC_011729  PCC7424_0488  short-chain dehydrogenase/reductase SDR  30.64 
 
 
261 aa  112  5e-24  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009075  BURPS668_A1346  short chain dehydrogenase/reductase family oxidoreductase  29.55 
 
 
308 aa  111  9e-24  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_2596  Short-chain dehydrogenase/reductase SDR  29.71 
 
 
287 aa  111  9e-24  Anabaena variabilis ATCC 29413  Bacteria  normal  0.7335  normal 
 
 
-
 
NC_007435  BURPS1710b_A2524  short chain dehydrogenase  29.55 
 
 
308 aa  111  9e-24  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1008  short chain dehydrogenase  29.55 
 
 
308 aa  111  9e-24  Burkholderia mallei NCTC 10247  Bacteria  normal  0.388516  n/a   
 
 
-
 
NC_008835  BMA10229_0559  short-chain dehydrogenase/reductase SDR  29.55 
 
 
308 aa  111  9e-24  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0827865  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1269  short chain dehydrogenase/reductase family oxidoreductase  29.55 
 
 
308 aa  111  9e-24  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1209  short-chain dehydrogenase/reductase SDR  31.43 
 
 
275 aa  111  1.0000000000000001e-23  Tsukamurella paurometabola DSM 20162  Bacteria  hitchhiker  0.00962961  n/a   
 
 
-
 
NC_012856  Rpic12D_3013  short-chain dehydrogenase/reductase SDR  30.69 
 
 
296 aa  111  1.0000000000000001e-23  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4527  short-chain dehydrogenase/reductase SDR  29.62 
 
 
311 aa  111  1.0000000000000001e-23  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.207166 
 
 
-
 
NC_008061  Bcen_4942  short-chain dehydrogenase/reductase SDR  31.56 
 
 
268 aa  111  1.0000000000000001e-23  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_3218  short-chain dehydrogenase/reductase SDR  31.56 
 
 
268 aa  111  1.0000000000000001e-23  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_2299  3-oxoacyl-(acyl-carrier-protein) reductase  32.09 
 
 
245 aa  110  2.0000000000000002e-23  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3360  short-chain dehydrogenase/reductase SDR  30.69 
 
 
296 aa  110  2.0000000000000002e-23  Ralstonia pickettii 12J  Bacteria  normal  0.0880635  normal 
 
 
-
 
NC_007348  Reut_B5157  Short-chain dehydrogenase/reductase SDR  30.26 
 
 
271 aa  110  3e-23  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_3796  putative short-chain dehydrogenase  29.43 
 
 
295 aa  109  4.0000000000000004e-23  Pseudomonas aeruginosa PA7  Bacteria  normal  0.205058  n/a   
 
 
-
 
NC_008009  Acid345_3255  short-chain dehydrogenase/reductase SDR  27.56 
 
 
262 aa  109  4.0000000000000004e-23  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.207826 
 
 
-
 
NC_010172  Mext_1321  short-chain dehydrogenase/reductase SDR  33.8 
 
 
271 aa  109  4.0000000000000004e-23  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.318083 
 
 
-
 
NC_010622  Bphy_0185  short chain dehydrogenase  36.36 
 
 
256 aa  109  5e-23  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_2965  Short-chain dehydrogenase/reductase SDR  28.35 
 
 
293 aa  108  6e-23  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_013922  Nmag_1126  short-chain dehydrogenase/reductase SDR  32.8 
 
 
338 aa  108  7.000000000000001e-23  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5625  short-chain dehydrogenase/reductase SDR  28.9 
 
 
309 aa  108  8.000000000000001e-23  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.285502  normal 
 
 
-
 
NC_011894  Mnod_7667  short-chain dehydrogenase/reductase SDR  29.46 
 
 
332 aa  108  8.000000000000001e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.755346  n/a   
 
 
-
 
NC_010730  SYO3AOP1_1671  3-oxoacyl-(acyl-carrier-protein) reductase  33.51 
 
 
246 aa  108  8.000000000000001e-23  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4675  short-chain dehydrogenase/reductase SDR  28.9 
 
 
309 aa  108  8.000000000000001e-23  Burkholderia cenocepacia HI2424  Bacteria  normal  0.396312  normal  0.215379 
 
 
-
 
NC_009439  Pmen_1266  short-chain dehydrogenase/reductase SDR  31.15 
 
 
278 aa  108  9.000000000000001e-23  Pseudomonas mendocina ymp  Bacteria  normal  0.343225  normal 
 
 
-
 
NC_008061  Bcen_3693  short-chain dehydrogenase/reductase SDR  29.23 
 
 
309 aa  108  1e-22  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2884  short-chain dehydrogenase/reductase SDR  28.57 
 
 
273 aa  108  1e-22  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3989  short-chain dehydrogenase/reductase SDR  32.78 
 
 
276 aa  107  2e-22  Mycobacterium sp. JLS  Bacteria  normal  0.171067  normal  0.181158 
 
 
-
 
NC_007511  Bcep18194_B1144  Short-chain dehydrogenase/reductase SDR  28.85 
 
 
307 aa  107  2e-22  Burkholderia sp. 383  Bacteria  normal  0.151567  normal  0.117156 
 
 
-
 
NC_010581  Bind_2990  short-chain dehydrogenase/reductase SDR  31.15 
 
 
336 aa  107  2e-22  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.753592 
 
 
-
 
NC_008146  Mmcs_3975  short-chain dehydrogenase/reductase SDR  32.78 
 
 
276 aa  107  2e-22  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4069  short-chain dehydrogenase/reductase SDR  28.52 
 
 
312 aa  107  2e-22  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.596903 
 
 
-
 
NC_008705  Mkms_4049  short-chain dehydrogenase/reductase SDR  32.78 
 
 
276 aa  107  2e-22  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2356  short-chain dehydrogenase/reductase SDR  28.34 
 
 
282 aa  106  3e-22  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0998128  n/a   
 
 
-
 
NC_010086  Bmul_4018  short-chain dehydrogenase/reductase SDR  28.24 
 
 
312 aa  106  3e-22  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.169146  normal  0.55969 
 
 
-
 
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