| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3168 |
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| Symbol | |
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| ID | 4014170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 3354330 |
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| End bp | 3355142 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637942835 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_549980 |
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| Protein GI | 91789028 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.273274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.685188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACTA TCGTAATTAC CGGGGCGTCC GATGGCATAG GTGCGGAGAT GGCGCGGCAA
CTGGCGCAAA CGCACCGCAC CGGCGTGGCA TTGGTGCTGG CTGCGCGCAA CGAAGCCTTG
CTCGCGGAAG TCGCCGCGCA ATGTGCGGCG CATGGCGCCC AGACGCTGGT GGTGAAAACC
GATGTCTCGG TCGAGGCCCA ATGCCGGCAG CTGATCGCCG CCGCTGTCGC CCGGTTTGGC
CGCATCGACG CGCTGGTCAA TAACGCCGGT CGGTCGGCGC AGGCGCTCTT TGAAGACGTC
AAAGCCGAAG ACCTGGCCTG GTACGAGCAA CTGATGCGCA TCAACCTCTG GGGCAGCGTC
TGGTGCACCC ATGCGGCTCT GCCTCATTTA AAGCAAAGCC GCGGGGCCAT CGTGGCCGTC
TCCAGCCTCG CCGGGCTGAT TGGCGTGCCG GGCCGGACCG CCTACAGCGC CACCAAATTT
GCCATGACGG GTTTCTTCGA GGCCCTGCGC GCGGAATTGA AAGGTGCCGG CGTCAGCGTG
ACGACCGTCT ATCCCGGCGT GGTCGCTACG CAGACCCGGT ATCGCGGCTT CAATGCCGCG
GGTGCTCCTG CCGACGCCAG CGGCCTGAAG GAAGACCAGG CCATGAGCGT TGAGGAATGC
GCAGGACTGA TTCTGCAGGG CATGGCACGG CGGGACCGCG AGGTGGTGAT GACGGCCAAA
GGCAGGCTGG GGCGCTGGCT CAAGCTGGTG GCGCCAGCCC GTGTAGAGTC GATGGCGCTG
GCCGCCCTCA AGGACGAGGT AAAACCTCAT TGA
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| Protein sequence | MKTIVITGAS DGIGAEMARQ LAQTHRTGVA LVLAARNEAL LAEVAAQCAA HGAQTLVVKT
DVSVEAQCRQ LIAAAVARFG RIDALVNNAG RSAQALFEDV KAEDLAWYEQ LMRINLWGSV
WCTHAALPHL KQSRGAIVAV SSLAGLIGVP GRTAYSATKF AMTGFFEALR AELKGAGVSV
TTVYPGVVAT QTRYRGFNAA GAPADASGLK EDQAMSVEEC AGLILQGMAR RDREVVMTAK
GRLGRWLKLV APARVESMAL AALKDEVKPH
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