More than 300 homologs were found in PanDaTox collection
for query gene Bpro_3168 on replicon NC_007948
Organism: Polaromonas sp. JS666



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007948  Bpro_3168  short chain dehydrogenase  100 
 
 
270 aa  543  1e-154  Polaromonas sp. JS666  Bacteria  normal  0.273274  normal  0.685188 
 
 
-
 
NC_009668  Oant_2951  short chain dehydrogenase  55.76 
 
 
276 aa  295  5e-79  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1414  short chain dehydrogenase  55.85 
 
 
270 aa  263  2e-69  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0438  short chain dehydrogenase  44.27 
 
 
267 aa  225  7e-58  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_0437  short chain dehydrogenase  43.51 
 
 
267 aa  225  8e-58  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3968  short chain dehydrogenase  46.21 
 
 
269 aa  224  2e-57  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0231224  normal  0.018096 
 
 
-
 
NC_008322  Shewmr7_3588  short chain dehydrogenase  43.13 
 
 
267 aa  222  7e-57  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0293  short chain dehydrogenase  44.19 
 
 
267 aa  221  8e-57  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3918  short chain dehydrogenase  43.41 
 
 
267 aa  221  9.999999999999999e-57  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_4040  short chain dehydrogenase  43.41 
 
 
267 aa  221  9.999999999999999e-57  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0389  short chain dehydrogenase  44.15 
 
 
270 aa  221  9.999999999999999e-57  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3844  short chain dehydrogenase  43.41 
 
 
267 aa  221  9.999999999999999e-57  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000447473 
 
 
-
 
NC_009052  Sbal_0416  short chain dehydrogenase  43.41 
 
 
267 aa  221  9.999999999999999e-57  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0441  short chain dehydrogenase  42.75 
 
 
267 aa  220  1.9999999999999999e-56  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_1902  short chain dehydrogenase  48.52 
 
 
269 aa  218  6e-56  Cyanothece sp. PCC 7425  Bacteria  normal  0.0327948  normal 
 
 
-
 
NC_009438  Sputcn32_3404  short chain dehydrogenase  42.37 
 
 
267 aa  218  7.999999999999999e-56  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_0429  short chain dehydrogenase  42.64 
 
 
267 aa  213  1.9999999999999998e-54  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3415  short chain dehydrogenase  41.06 
 
 
268 aa  201  8e-51  Shewanella loihica PV-4  Bacteria  normal  0.560569  normal 
 
 
-
 
NC_013061  Phep_3027  short-chain dehydrogenase/reductase SDR  39.47 
 
 
272 aa  196  2.0000000000000003e-49  Pedobacter heparinus DSM 2366  Bacteria  normal  hitchhiker  0.00333155 
 
 
-
 
NC_013730  Slin_1686  short-chain dehydrogenase/reductase SDR  38.49 
 
 
269 aa  188  1e-46  Spirosoma linguale DSM 74  Bacteria  normal  0.292744  normal 
 
 
-
 
NC_013132  Cpin_4665  short-chain dehydrogenase/reductase SDR  39.62 
 
 
266 aa  186  4e-46  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.871012  hitchhiker  0.000000000383418 
 
 
-
 
NC_011693  PHATRDRAFT_16295  predicted protein  44.81 
 
 
237 aa  177  2e-43  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.0303319  n/a   
 
 
-
 
NC_013132  Cpin_6402  short-chain dehydrogenase/reductase SDR  33.59 
 
 
277 aa  145  1e-33  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.000182624  normal 
 
 
-
 
NC_009439  Pmen_3735  short chain dehydrogenase  36.12 
 
 
281 aa  137  1e-31  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1326  short-chain dehydrogenase/reductase SDR  36.33 
 
 
336 aa  136  3.0000000000000003e-31  Methylobacterium populi BJ001  Bacteria  normal  0.945072  normal  0.131603 
 
 
-
 
NC_008463  PA14_12680  short chain dehydrogenase  35.4 
 
 
278 aa  136  5e-31  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0488  short-chain dehydrogenase/reductase SDR  39.7 
 
 
261 aa  135  8e-31  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008148  Rxyl_0016  short-chain dehydrogenase/reductase SDR  39.91 
 
 
260 aa  134  9.999999999999999e-31  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_1014  short-chain dehydrogenase/reductase SDR  37.94 
 
 
336 aa  135  9.999999999999999e-31  Methylobacterium extorquens PA1  Bacteria  normal  0.264982  normal 
 
 
-
 
NC_011757  Mchl_0762  short-chain dehydrogenase/reductase SDR  37.94 
 
 
336 aa  134  1.9999999999999998e-30  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_7667  short-chain dehydrogenase/reductase SDR  36.76 
 
 
332 aa  133  3.9999999999999996e-30  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.755346  n/a   
 
 
-
 
NC_013159  Svir_33490  short-chain alcohol dehydrogenase  40.1 
 
 
247 aa  132  7.999999999999999e-30  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.343117  normal  0.392445 
 
 
-
 
NC_007355  Mbar_A2512  3-oxoacyl-(acyl-carrier protein) reductase  38.07 
 
 
236 aa  131  1.0000000000000001e-29  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0588198  normal  0.237046 
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  31.34 
 
 
264 aa  130  2.0000000000000002e-29  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_013037  Dfer_2713  short-chain dehydrogenase/reductase SDR  35.83 
 
 
266 aa  130  2.0000000000000002e-29  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_0761  short-chain dehydrogenase/reductase SDR  35.06 
 
 
277 aa  130  2.0000000000000002e-29  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.416641 
 
 
-
 
NC_013525  Tter_0451  short-chain dehydrogenase/reductase SDR  38.95 
 
 
339 aa  130  3e-29  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012853  Rleg_5897  short chain dehydrogenase  43.07 
 
 
328 aa  130  3e-29  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5847  short-chain dehydrogenase/reductase SDR  37.55 
 
 
281 aa  129  4.0000000000000003e-29  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0943  Short-chain dehydrogenase/reductase SDR  37.44 
 
 
293 aa  129  6e-29  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_009079  BMA10247_A0120  short chain dehydrogenase/reductase family oxidoreductase  43.52 
 
 
302 aa  128  9.000000000000001e-29  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_0208  short-chain dehydrogenase/reductase SDR  35.48 
 
 
263 aa  128  9.000000000000001e-29  Spirosoma linguale DSM 74  Bacteria  normal  0.196422  normal 
 
 
-
 
NC_009484  Acry_1087  short-chain dehydrogenase/reductase SDR  37.25 
 
 
286 aa  128  9.000000000000001e-29  Acidiphilium cryptum JF-5  Bacteria  normal  0.252629  n/a   
 
 
-
 
NC_008835  BMA10229_1539  short chain dehydrogenase/reductase family oxidoreductase  43.52 
 
 
302 aa  128  9.000000000000001e-29  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0101  short chain dehydrogenase/reductase family oxidoreductase  43.52 
 
 
302 aa  128  1.0000000000000001e-28  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1074  short chain dehydrogenase/reductase family oxidoreductase  43.52 
 
 
302 aa  128  1.0000000000000001e-28  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4853  short-chain dehydrogenase/reductase SDR  38.74 
 
 
248 aa  128  1.0000000000000001e-28  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.154391  normal  0.241568 
 
 
-
 
NC_008312  Tery_3453  short-chain dehydrogenase/reductase SDR  38.31 
 
 
267 aa  128  1.0000000000000001e-28  Trichodesmium erythraeum IMS101  Bacteria  normal  0.282255  normal 
 
 
-
 
NC_008784  BMASAVP1_1262  short chain dehydrogenase/reductase family oxidoreductase  43.52 
 
 
302 aa  128  1.0000000000000001e-28  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2820  dehydrogenases with different specificities  43.52 
 
 
302 aa  128  1.0000000000000001e-28  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2673  short chain dehydrogenase/reductase family oxidoreductase  43.52 
 
 
302 aa  128  1.0000000000000001e-28  Burkholderia pseudomallei 1106a  Bacteria  normal  0.181377  n/a   
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  34.33 
 
 
264 aa  126  3e-28  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0404  short chain dehydrogenase/reductase family oxidoreductase  42.49 
 
 
302 aa  127  3e-28  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_0379  short-chain dehydrogenase/reductase SDR  31.5 
 
 
262 aa  126  3e-28  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  34.33 
 
 
264 aa  126  3e-28  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_009523  RoseRS_1481  short-chain dehydrogenase/reductase SDR  38.62 
 
 
239 aa  125  5e-28  Roseiflexus sp. RS-1  Bacteria  normal  0.175599  normal 
 
 
-
 
NC_010515  Bcenmc03_3856  short-chain dehydrogenase/reductase SDR  38.74 
 
 
300 aa  125  6e-28  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.514987 
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  38.54 
 
 
264 aa  124  1e-27  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  38.54 
 
 
264 aa  124  1e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011738  PCC7424_5709  short-chain dehydrogenase/reductase SDR  36.55 
 
 
347 aa  125  1e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  38.54 
 
 
264 aa  124  1e-27  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6955  short-chain dehydrogenase/reductase SDR  36.29 
 
 
332 aa  124  2e-27  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0416972 
 
 
-
 
NC_012858  Rleg_6867  short chain dehydrogenase  41.58 
 
 
333 aa  123  2e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_0120  short-chain dehydrogenase/reductase SDR  38.42 
 
 
354 aa  123  2e-27  Geobacter sp. M21  Bacteria  n/a    normal  0.718494 
 
 
-
 
NC_007511  Bcep18194_B2443  Short-chain dehydrogenase/reductase SDR  38.34 
 
 
300 aa  124  2e-27  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_5043  short-chain dehydrogenase/reductase SDR  44.04 
 
 
300 aa  124  2e-27  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.680577 
 
 
-
 
NC_010581  Bind_2990  short-chain dehydrogenase/reductase SDR  33.98 
 
 
336 aa  124  2e-27  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.753592 
 
 
-
 
NC_013037  Dfer_5584  short-chain dehydrogenase/reductase SDR  38.05 
 
 
344 aa  124  2e-27  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.753226  normal  0.910238 
 
 
-
 
NC_008148  Rxyl_3000  short-chain dehydrogenase/reductase SDR  40.48 
 
 
241 aa  124  2e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  38.54 
 
 
264 aa  123  3e-27  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_008061  Bcen_4697  short-chain dehydrogenase/reductase SDR  38.34 
 
 
300 aa  123  3e-27  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.858083  n/a   
 
 
-
 
NC_008543  Bcen2424_3665  short-chain dehydrogenase/reductase SDR  38.34 
 
 
300 aa  123  3e-27  Burkholderia cenocepacia HI2424  Bacteria  normal  0.196954  normal 
 
 
-
 
NC_010552  BamMC406_3569  short-chain dehydrogenase/reductase SDR  42.71 
 
 
308 aa  122  4e-27  Burkholderia ambifaria MC40-6  Bacteria  normal  0.683076  hitchhiker  0.00146118 
 
 
-
 
NC_010511  M446_1704  short-chain dehydrogenase/reductase SDR  34.93 
 
 
327 aa  122  4e-27  Methylobacterium sp. 4-46  Bacteria  normal  0.151565  normal 
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  38.54 
 
 
264 aa  122  4e-27  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_008391  Bamb_5413  short-chain dehydrogenase/reductase SDR  42.49 
 
 
308 aa  123  4e-27  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  38.02 
 
 
264 aa  122  5e-27  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0808  short-chain dehydrogenase/reductase SDR  39.9 
 
 
252 aa  122  5e-27  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2831  short-chain dehydrogenase/reductase SDR  33.58 
 
 
264 aa  122  5e-27  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3865  short-chain dehydrogenase/reductase SDR  37.84 
 
 
247 aa  122  5e-27  Serratia proteamaculans 568  Bacteria  normal  0.269971  normal 
 
 
-
 
NC_010087  Bmul_5635  short-chain dehydrogenase/reductase SDR  38.46 
 
 
247 aa  122  8e-27  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3796  putative short-chain dehydrogenase  34.91 
 
 
295 aa  121  9.999999999999999e-27  Pseudomonas aeruginosa PA7  Bacteria  normal  0.205058  n/a   
 
 
-
 
NC_009439  Pmen_4578  short-chain dehydrogenase/reductase SDR  37.44 
 
 
264 aa  121  9.999999999999999e-27  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_2071  short-chain dehydrogenase/reductase SDR  37.57 
 
 
239 aa  121  9.999999999999999e-27  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.420603  normal 
 
 
-
 
NC_013132  Cpin_0149  short-chain dehydrogenase/reductase SDR  38.74 
 
 
326 aa  121  9.999999999999999e-27  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_0726  short-chain dehydrogenase/reductase SDR  38.5 
 
 
366 aa  120  1.9999999999999998e-26  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.642345  normal 
 
 
-
 
NC_013411  GYMC61_0353  short-chain dehydrogenase/reductase SDR  35.23 
 
 
262 aa  120  1.9999999999999998e-26  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008463  PA14_44570  putative short-chain dehydrogenase  34.55 
 
 
295 aa  120  1.9999999999999998e-26  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.30545 
 
 
-
 
NC_009972  Haur_1067  short-chain dehydrogenase/reductase SDR  41.05 
 
 
258 aa  120  1.9999999999999998e-26  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_3013  short-chain dehydrogenase/reductase SDR  32.87 
 
 
296 aa  120  1.9999999999999998e-26  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_1056  short-chain dehydrogenase/reductase SDR  34.85 
 
 
332 aa  120  3e-26  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.843879 
 
 
-
 
NC_011894  Mnod_2884  short-chain dehydrogenase/reductase SDR  36.3 
 
 
273 aa  119  3.9999999999999996e-26  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_3255  short-chain dehydrogenase/reductase SDR  36.17 
 
 
262 aa  119  3.9999999999999996e-26  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.207826 
 
 
-
 
NC_008025  Dgeo_0458  short-chain dehydrogenase/reductase SDR  36.12 
 
 
257 aa  119  3.9999999999999996e-26  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.706164 
 
 
-
 
NC_009719  Plav_0391  short-chain dehydrogenase/reductase SDR  33.46 
 
 
279 aa  119  4.9999999999999996e-26  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.319463  normal 
 
 
-
 
NC_011729  PCC7424_0301  short-chain dehydrogenase/reductase SDR  35.88 
 
 
305 aa  119  6e-26  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0783167 
 
 
-
 
NC_010338  Caul_4845  short-chain dehydrogenase/reductase SDR  41.03 
 
 
252 aa  119  7e-26  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_2238  short-chain dehydrogenase/reductase SDR  38.22 
 
 
317 aa  118  9.999999999999999e-26  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0423  short-chain dehydrogenase/reductase SDR  40.62 
 
 
291 aa  118  9.999999999999999e-26  Mycobacterium sp. MCS  Bacteria  normal  0.389698  n/a   
 
 
-
 
NC_009077  Mjls_0410  short-chain dehydrogenase/reductase SDR  40.62 
 
 
291 aa  118  9.999999999999999e-26  Mycobacterium sp. JLS  Bacteria  normal  normal  0.526015 
 
 
-
 
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