More than 300 homologs were found in PanDaTox collection
for query gene Sputcn32_3404 on replicon NC_009438
Organism: Shewanella putrefaciens CN-32



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009438  Sputcn32_3404  short chain dehydrogenase  100 
 
 
267 aa  541  1e-153  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3588  short chain dehydrogenase  88.76 
 
 
267 aa  494  1e-139  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0438  short chain dehydrogenase  88.39 
 
 
267 aa  493  9.999999999999999e-139  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_0441  short chain dehydrogenase  88.01 
 
 
267 aa  491  9.999999999999999e-139  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0437  short chain dehydrogenase  88.01 
 
 
267 aa  489  1e-137  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3844  short chain dehydrogenase  86.89 
 
 
267 aa  482  1e-135  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000447473 
 
 
-
 
NC_009665  Shew185_3918  short chain dehydrogenase  86.52 
 
 
267 aa  481  1e-135  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_4040  short chain dehydrogenase  86.89 
 
 
267 aa  482  1e-135  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0416  short chain dehydrogenase  86.89 
 
 
267 aa  482  1e-135  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0293  short chain dehydrogenase  70.3 
 
 
267 aa  404  1.0000000000000001e-112  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_0429  short chain dehydrogenase  71.16 
 
 
267 aa  400  9.999999999999999e-111  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3415  short chain dehydrogenase  70.15 
 
 
268 aa  384  1e-106  Shewanella loihica PV-4  Bacteria  normal  0.560569  normal 
 
 
-
 
NC_008700  Sama_0389  short chain dehydrogenase  68.4 
 
 
270 aa  375  1e-103  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3968  short chain dehydrogenase  49.41 
 
 
269 aa  254  9e-67  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0231224  normal  0.018096 
 
 
-
 
NC_011884  Cyan7425_1902  short chain dehydrogenase  47.91 
 
 
269 aa  245  6e-64  Cyanothece sp. PCC 7425  Bacteria  normal  0.0327948  normal 
 
 
-
 
NC_007948  Bpro_3168  short chain dehydrogenase  42.37 
 
 
270 aa  218  7.999999999999999e-56  Polaromonas sp. JS666  Bacteria  normal  0.273274  normal  0.685188 
 
 
-
 
NC_007347  Reut_A1414  short chain dehydrogenase  42.26 
 
 
270 aa  208  6e-53  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_1686  short-chain dehydrogenase/reductase SDR  39.39 
 
 
269 aa  194  1e-48  Spirosoma linguale DSM 74  Bacteria  normal  0.292744  normal 
 
 
-
 
NC_013061  Phep_3027  short-chain dehydrogenase/reductase SDR  39.77 
 
 
272 aa  193  3e-48  Pedobacter heparinus DSM 2366  Bacteria  normal  hitchhiker  0.00333155 
 
 
-
 
NC_009668  Oant_2951  short chain dehydrogenase  39.85 
 
 
276 aa  192  5e-48  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_4665  short-chain dehydrogenase/reductase SDR  36.76 
 
 
266 aa  179  2.9999999999999997e-44  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.871012  hitchhiker  0.000000000383418 
 
 
-
 
NC_011693  PHATRDRAFT_16295  predicted protein  40 
 
 
237 aa  173  2.9999999999999996e-42  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.0303319  n/a   
 
 
-
 
NC_013037  Dfer_2713  short-chain dehydrogenase/reductase SDR  36.98 
 
 
266 aa  168  8e-41  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3735  short chain dehydrogenase  38.74 
 
 
281 aa  167  2e-40  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_12680  short chain dehydrogenase  38.04 
 
 
278 aa  158  8e-38  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_6402  short-chain dehydrogenase/reductase SDR  35.38 
 
 
277 aa  154  1e-36  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.000182624  normal 
 
 
-
 
NC_010571  Oter_1684  short-chain dehydrogenase/reductase SDR  37.45 
 
 
263 aa  151  1e-35  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  33.83 
 
 
264 aa  143  2e-33  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  33.83 
 
 
264 aa  143  2e-33  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  33.83 
 
 
264 aa  143  2e-33  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_0208  short-chain dehydrogenase/reductase SDR  35.94 
 
 
263 aa  142  5e-33  Spirosoma linguale DSM 74  Bacteria  normal  0.196422  normal 
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  33.46 
 
 
264 aa  141  9e-33  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_0379  short-chain dehydrogenase/reductase SDR  32.32 
 
 
262 aa  141  9.999999999999999e-33  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  33.83 
 
 
264 aa  141  9.999999999999999e-33  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  34.21 
 
 
264 aa  140  1.9999999999999998e-32  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  34.21 
 
 
264 aa  140  1.9999999999999998e-32  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  33.83 
 
 
264 aa  140  1.9999999999999998e-32  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_008148  Rxyl_3000  short-chain dehydrogenase/reductase SDR  38.77 
 
 
241 aa  139  3.9999999999999997e-32  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1826  3-ketoacyl-(acyl-carrier-protein) reductase  36.48 
 
 
239 aa  139  7e-32  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A2065  3-ketoacyl-(acyl-carrier-protein) reductase  36.48 
 
 
239 aa  137  1e-31  Bacillus cereus AH187  Bacteria  hitchhiker  0.00000861938  n/a   
 
 
-
 
NC_011725  BCB4264_A1964  3-ketoacyl-(acyl-carrier-protein) reductase  36.48 
 
 
239 aa  137  1e-31  Bacillus cereus B4264  Bacteria  normal  0.130885  n/a   
 
 
-
 
NC_011773  BCAH820_1995  3-ketoacyl-(acyl-carrier-protein) reductase  36.48 
 
 
239 aa  137  1e-31  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  5.591310000000001e-44 
 
 
-
 
NC_011772  BCG9842_B3364  3-ketoacyl-(acyl-carrier-protein) reductase  36.48 
 
 
239 aa  137  1e-31  Bacillus cereus G9842  Bacteria  normal  0.115947  hitchhiker  0.00000000000000894376 
 
 
-
 
NC_003909  BCE_2044  3-ketoacyl-(acyl-carrier-protein) reductase  36.48 
 
 
242 aa  137  2e-31  Bacillus cereus ATCC 10987  Bacteria  normal  0.252391  n/a   
 
 
-
 
NC_005945  BAS1819  3-ketoacyl-(acyl-carrier-protein) reductase  36.48 
 
 
242 aa  137  2e-31  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1793  3-ketoacyl-(acyl-carrier-protein) reductase  36.48 
 
 
242 aa  137  2e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.512815  n/a   
 
 
-
 
NC_006274  BCZK1775  3-ketoacyl-(acyl-carrier-protein) reductase  36.48 
 
 
242 aa  137  2e-31  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1958  3-ketoacyl-(acyl-carrier-protein) reductase  36.48 
 
 
242 aa  137  2e-31  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1494  3-ketoacyl-(acyl-carrier-protein) reductase  35.66 
 
 
239 aa  137  2e-31  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.000128809  n/a   
 
 
-
 
NC_011725  BCB4264_A4244  oxidoreductase, short-chain dehydrogenase/reductase family  32.71 
 
 
264 aa  137  2e-31  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0992  oxidoreductase, short-chain dehydrogenase/reductase family  32.71 
 
 
264 aa  137  2e-31  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0159  short-chain dehydrogenase/reductase SDR  36.51 
 
 
249 aa  134  9.999999999999999e-31  Caulobacter sp. K31  Bacteria  normal  0.410897  normal  0.168063 
 
 
-
 
NC_009441  Fjoh_5037  3-ketoacyl-(acyl-carrier-protein) reductase  32.91 
 
 
238 aa  135  9.999999999999999e-31  Flavobacterium johnsoniae UW101  Bacteria  normal  0.293143  n/a   
 
 
-
 
NC_011729  PCC7424_0488  short-chain dehydrogenase/reductase SDR  38.95 
 
 
261 aa  132  3.9999999999999996e-30  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009674  Bcer98_2831  short-chain dehydrogenase/reductase SDR  33.83 
 
 
264 aa  132  5e-30  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_1337  3-ketoacyl-(acyl-carrier-protein) reductase  35 
 
 
238 aa  131  1.0000000000000001e-29  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.541378  normal 
 
 
-
 
NC_007974  Rmet_5847  short-chain dehydrogenase/reductase SDR  37.5 
 
 
281 aa  130  2.0000000000000002e-29  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A1489  short chain dehydrogenase  34.1 
 
 
296 aa  129  6e-29  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0458  short-chain dehydrogenase/reductase SDR  44.1 
 
 
257 aa  127  1.0000000000000001e-28  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.706164 
 
 
-
 
NC_013061  Phep_4049  3-ketoacyl-(acyl-carrier-protein) reductase  35.02 
 
 
238 aa  128  1.0000000000000001e-28  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_0265  3-oxoacyl-[acyl-carrier-protein] reductase  38.1 
 
 
248 aa  127  2.0000000000000002e-28  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.534726  normal 
 
 
-
 
NC_012793  GWCH70_1081  3-ketoacyl-(acyl-carrier-protein) reductase  36.73 
 
 
246 aa  125  5e-28  Geobacillus sp. WCH70  Bacteria  normal  0.46401  n/a   
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  30.68 
 
 
264 aa  125  1e-27  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_007794  Saro_2916  short-chain dehydrogenase/reductase SDR  37.18 
 
 
272 aa  124  2e-27  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.971691  n/a   
 
 
-
 
NC_009972  Haur_1067  short-chain dehydrogenase/reductase SDR  38.92 
 
 
258 aa  123  3e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B2443  Short-chain dehydrogenase/reductase SDR  39.49 
 
 
300 aa  123  3e-27  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_3856  short-chain dehydrogenase/reductase SDR  40 
 
 
300 aa  123  3e-27  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.514987 
 
 
-
 
NC_013743  Htur_3538  short-chain dehydrogenase/reductase SDR  32.64 
 
 
248 aa  123  4e-27  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_010086  Bmul_5043  short-chain dehydrogenase/reductase SDR  39.49 
 
 
300 aa  123  4e-27  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.680577 
 
 
-
 
NC_008312  Tery_3453  short-chain dehydrogenase/reductase SDR  36.32 
 
 
267 aa  122  4e-27  Trichodesmium erythraeum IMS101  Bacteria  normal  0.282255  normal 
 
 
-
 
NC_010172  Mext_1014  short-chain dehydrogenase/reductase SDR  33.85 
 
 
336 aa  122  5e-27  Methylobacterium extorquens PA1  Bacteria  normal  0.264982  normal 
 
 
-
 
NC_011679  PHATR_36881  2-deoxy-D-gluconate 3-dehydrogenase  32.2 
 
 
308 aa  122  5e-27  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.804236  n/a   
 
 
-
 
NC_007413  Ava_0943  Short-chain dehydrogenase/reductase SDR  35.38 
 
 
293 aa  122  5e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1266  short-chain dehydrogenase/reductase SDR  33.45 
 
 
278 aa  122  5e-27  Pseudomonas mendocina ymp  Bacteria  normal  0.343225  normal 
 
 
-
 
NC_011894  Mnod_7667  short-chain dehydrogenase/reductase SDR  31.52 
 
 
332 aa  122  7e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.755346  n/a   
 
 
-
 
NC_009674  Bcer98_1043  acetoacetyl-CoA reductase  37.63 
 
 
247 aa  121  9.999999999999999e-27  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.8589  n/a   
 
 
-
 
NC_011757  Mchl_0762  short-chain dehydrogenase/reductase SDR  33.46 
 
 
336 aa  121  9.999999999999999e-27  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5157  Short-chain dehydrogenase/reductase SDR  33.09 
 
 
271 aa  121  9.999999999999999e-27  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A2512  3-oxoacyl-(acyl-carrier protein) reductase  35.42 
 
 
236 aa  121  9.999999999999999e-27  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0588198  normal  0.237046 
 
 
-
 
NC_013411  GYMC61_0353  short-chain dehydrogenase/reductase SDR  33.95 
 
 
262 aa  121  9.999999999999999e-27  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008061  Bcen_4697  short-chain dehydrogenase/reductase SDR  39.49 
 
 
300 aa  121  9.999999999999999e-27  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.858083  n/a   
 
 
-
 
NC_008391  Bamb_5413  short-chain dehydrogenase/reductase SDR  37.95 
 
 
308 aa  121  9.999999999999999e-27  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_3665  short-chain dehydrogenase/reductase SDR  39.49 
 
 
300 aa  121  9.999999999999999e-27  Burkholderia cenocepacia HI2424  Bacteria  normal  0.196954  normal 
 
 
-
 
NC_010552  BamMC406_3569  short-chain dehydrogenase/reductase SDR  38.38 
 
 
308 aa  120  1.9999999999999998e-26  Burkholderia ambifaria MC40-6  Bacteria  normal  0.683076  hitchhiker  0.00146118 
 
 
-
 
NC_009485  BBta_6766  putative short-chain dehydrogenase  37.75 
 
 
279 aa  120  1.9999999999999998e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.353478  normal 
 
 
-
 
NC_004116  SAG0348  3-ketoacyl-(acyl-carrier-protein) reductase  36.84 
 
 
244 aa  120  3e-26  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.708158  n/a   
 
 
-
 
NC_009523  RoseRS_3239  short-chain dehydrogenase/reductase SDR  38.38 
 
 
258 aa  119  3.9999999999999996e-26  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.703839 
 
 
-
 
NC_010581  Bind_2990  short-chain dehydrogenase/reductase SDR  36.9 
 
 
336 aa  119  3.9999999999999996e-26  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.753592 
 
 
-
 
NC_007517  Gmet_2194  Short-chain dehydrogenase/reductase SDR  32.55 
 
 
255 aa  119  7e-26  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00000131904  normal  0.0140674 
 
 
-
 
NC_010505  Mrad2831_5451  short-chain dehydrogenase/reductase SDR  41.24 
 
 
281 aa  119  7e-26  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.255746 
 
 
-
 
NC_013743  Htur_2906  short-chain dehydrogenase/reductase SDR  36.84 
 
 
258 aa  119  7e-26  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_2271  short-chain dehydrogenase/reductase SDR  30.53 
 
 
262 aa  118  9.999999999999999e-26  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_3987  short-chain dehydrogenase/reductase SDR  41.15 
 
 
261 aa  118  9.999999999999999e-26  Spirosoma linguale DSM 74  Bacteria  normal  0.745234  normal  0.0404538 
 
 
-
 
NC_011884  Cyan7425_0579  short chain dehydrogenase  30.47 
 
 
336 aa  118  9.999999999999999e-26  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0852  short-chain dehydrogenase/reductase SDR  35.62 
 
 
286 aa  118  9.999999999999999e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.068211 
 
 
-
 
NC_013037  Dfer_0299  short-chain dehydrogenase/reductase SDR  33.04 
 
 
261 aa  117  1.9999999999999998e-25  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.385793 
 
 
-
 
NC_011757  Mchl_0767  short-chain dehydrogenase/reductase SDR  33.89 
 
 
330 aa  117  1.9999999999999998e-25  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.415615 
 
 
-
 
NC_008025  Dgeo_2238  short-chain dehydrogenase/reductase SDR  38.34 
 
 
317 aa  117  1.9999999999999998e-25  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11068  oxidoreductase  37.22 
 
 
301 aa  117  1.9999999999999998e-25  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.205536 
 
 
-
 
NC_012850  Rleg_2480  short-chain dehydrogenase/reductase SDR  39.9 
 
 
245 aa  117  3e-25  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
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