Gene Gmet_2194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2194 
Symbol 
ID3739567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2481897 
End bp2482664 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content55% 
IMG OID637779486 
ProductShort-chain dehydrogenase/reductase SDR 
Protein accessionYP_385146 
Protein GI78223399 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00000131904 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0140674 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTTGG AACGTTTCAG TCTGAAAGGT AAAACCGCTA TCGTCACCGG TGCCAGTCAG 
GGGCTGGGTG AAGCCATGGC ACTGGGTCTG GCGGAAGCAG GTGCCAATCT GGTGCTGGCG
AGCCGCAACG AAGCCAGTAT GGCCAAGGTC GCTTCCGAGG TGACCTCAAA AGGGGTCCAG
TGTCTTACGG TCAAAACGGA CATGCTGAAG GCCGATGACA TTCAGGCGAT GGTGGATAAG
GGGATCGCCC AATTCGGAAC GATCGATATC CTGGTCAACA ATGCCGGCAT CAATCTGGTC
AAGCCGTTTG TGAATCTTAC CGAGGAGGAC TGGGACTCGG TCGTTGATAC GAACCTCAAA
GGATATTTCC TCTGTAGCCA GGTTGTGGGC AGGGAAATGA TCAAGAACAA GAACGGCTGT
GTTATCAACA ATGCCTCCGT CTTCGGTCTC AGGGGCTTTC CCAATATTGC GTCATACATA
GCCAGCAAGG GTGGGGTTGT CCAACTGACC AGGGGATTGG CCGTGGAATG GGCCCGTCAC
AATATCCGGG TGAACTGTAT TGCCCCGGGC TATATCGTTA CCGAAATGGC CAAGAGGGAT
ATTGAGACAA ATCCGAAGAT TCTGGAGCAG AACCTGCTGA AGATCCCCAT GAAAAGGGGC
GGTCAGCCCC GGGAAGTCGC CGATGTCGTG GTGTTCCTGG CGTCGGAGGC CTCAAGCTAC
ATGACAGGAC AGATCGTCTC CATGGATGGC GGCTGGTCGG CTTTCTAG
 
Protein sequence
MGLERFSLKG KTAIVTGASQ GLGEAMALGL AEAGANLVLA SRNEASMAKV ASEVTSKGVQ 
CLTVKTDMLK ADDIQAMVDK GIAQFGTIDI LVNNAGINLV KPFVNLTEED WDSVVDTNLK
GYFLCSQVVG REMIKNKNGC VINNASVFGL RGFPNIASYI ASKGGVVQLT RGLAVEWARH
NIRVNCIAPG YIVTEMAKRD IETNPKILEQ NLLKIPMKRG GQPREVADVV VFLASEASSY
MTGQIVSMDG GWSAF