134 homologs were found in PanDaTox collection
for query gene Shel_17090 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013165  Shel_17090  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  100 
 
 
485 aa  983    Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1093  transcriptional regulator, LuxR family  35.17 
 
 
505 aa  67.4  0.0000000006  Eggerthella lenta DSM 2243  Bacteria  normal  0.569375  hitchhiker  0.0000000000000377381 
 
 
-
 
NC_013204  Elen_0289  transcriptional regulator, LuxR family  34.57 
 
 
498 aa  59.7  0.0000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.797409 
 
 
-
 
NC_013204  Elen_0514  transcriptional regulator, LuxR family  35.94 
 
 
493 aa  58.9  0.0000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.559597 
 
 
-
 
NC_013204  Elen_2816  transcriptional regulator, LuxR family  40.3 
 
 
471 aa  58.5  0.0000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.138304  hitchhiker  0.00338242 
 
 
-
 
NC_013165  Shel_13310  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  36.76 
 
 
469 aa  58.2  0.0000003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0175254  normal 
 
 
-
 
NC_013170  Ccur_03610  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  33.75 
 
 
470 aa  57.8  0.0000004  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.166414  normal  0.0491532 
 
 
-
 
NC_013170  Ccur_13440  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  38.36 
 
 
509 aa  58.2  0.0000004  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2795  transcriptional regulator, LuxR family  33.73 
 
 
468 aa  57.4  0.0000006  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.000289432 
 
 
-
 
NC_013170  Ccur_01760  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  28.32 
 
 
546 aa  57  0.0000007  Cryptobacterium curtum DSM 15641  Bacteria  normal  hitchhiker  0.0000265618 
 
 
-
 
NC_013170  Ccur_13370  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  32.5 
 
 
537 aa  57  0.0000007  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.925648  normal 
 
 
-
 
NC_013204  Elen_0985  transcriptional regulator, LuxR family  34.94 
 
 
476 aa  57  0.0000007  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.880452 
 
 
-
 
NC_013204  Elen_0473  transcriptional regulator, LuxR family  38.1 
 
 
488 aa  56.2  0.000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.815594  normal 
 
 
-
 
NC_013204  Elen_0518  transcriptional regulator, LuxR family  29.13 
 
 
488 aa  56.2  0.000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.982453  normal  0.339001 
 
 
-
 
NC_013170  Ccur_12490  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  33.77 
 
 
560 aa  55.8  0.000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0578  transcriptional regulator, LuxR family  30.49 
 
 
474 aa  55.5  0.000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.28219  normal 
 
 
-
 
NC_013204  Elen_1389  transcriptional regulator, LuxR family  37.5 
 
 
478 aa  55.1  0.000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.544965  normal 
 
 
-
 
NC_013204  Elen_3022  ATP-dependent transcriptional regulator, MalT- like, LuxR family  35.48 
 
 
485 aa  54.3  0.000005  Eggerthella lenta DSM 2243  Bacteria  normal  0.709367  normal 
 
 
-
 
NC_013204  Elen_0500  transcriptional regulator, LuxR family  29.13 
 
 
487 aa  53.9  0.000006  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.472786 
 
 
-
 
NC_013204  Elen_2779  transcriptional regulator, LuxR family  37.29 
 
 
505 aa  53.5  0.000008  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.980405 
 
 
-
 
NC_013204  Elen_0108  transcriptional regulator, LuxR family  35.62 
 
 
493 aa  53.5  0.000008  Eggerthella lenta DSM 2243  Bacteria  normal  0.44109  normal 
 
 
-
 
NC_013204  Elen_0617  transcriptional regulator, LuxR family  31.16 
 
 
505 aa  53.5  0.000008  Eggerthella lenta DSM 2243  Bacteria  normal  0.0935525  normal 
 
 
-
 
NC_013204  Elen_0209  transcriptional regulator, LuxR family  33.96 
 
 
487 aa  52.8  0.00001  Eggerthella lenta DSM 2243  Bacteria  normal  0.213353  normal  0.452607 
 
 
-
 
NC_013061  Phep_1616  response regulator receiver  36.67 
 
 
210 aa  52  0.00002  Pedobacter heparinus DSM 2366  Bacteria  normal  0.869432  normal 
 
 
-
 
NC_013204  Elen_2812  transcriptional regulator, LuxR family  32.53 
 
 
522 aa  52.4  0.00002  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.000674561  hitchhiker  0.0000653029 
 
 
-
 
NC_013204  Elen_0461  transcriptional regulator, LuxR family  30.77 
 
 
542 aa  52  0.00003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0496  transcriptional regulator, LuxR family  40 
 
 
510 aa  51.6  0.00003  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.484054 
 
 
-
 
NC_013204  Elen_2114  transcriptional regulator, LuxR family  33.7 
 
 
191 aa  51.2  0.00004  Eggerthella lenta DSM 2243  Bacteria  unclonable  0.00000000451621  normal  0.459179 
 
 
-
 
NC_013165  Shel_12700  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  30.38 
 
 
488 aa  51.2  0.00004  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1997  two component transcriptional regulator, LuxR family protein  41.94 
 
 
197 aa  50.8  0.00005  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.333764  n/a   
 
 
-
 
NC_013204  Elen_2688  transcriptional regulator, LuxR family  31.82 
 
 
470 aa  50.8  0.00006  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2742  transcriptional regulator, LuxR family  36.07 
 
 
544 aa  50.8  0.00006  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2532  transcriptional regulator, LuxR family  32.56 
 
 
500 aa  50.8  0.00006  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_23080  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  34.15 
 
 
545 aa  50.4  0.00006  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.865531  normal 
 
 
-
 
NC_013204  Elen_2929  transcriptional regulator, LuxR family  35.48 
 
 
462 aa  50.4  0.00006  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1903  transcriptional regulator, LuxR family  36.51 
 
 
196 aa  50.4  0.00007  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.000000231921 
 
 
-
 
NC_013204  Elen_0421  transcriptional regulator, LuxR family  28.57 
 
 
552 aa  50.4  0.00007  Eggerthella lenta DSM 2243  Bacteria  normal  0.0413788  hitchhiker  0.00000000225621 
 
 
-
 
NC_013170  Ccur_13650  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  24.18 
 
 
464 aa  50.1  0.00008  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_08650  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  38.33 
 
 
508 aa  50.1  0.00009  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.197798  normal  0.463051 
 
 
-
 
NC_013204  Elen_0157  transcriptional regulator, LuxR family  30.39 
 
 
321 aa  50.1  0.00009  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2412  hypothetical protein  35.48 
 
 
377 aa  49.7  0.0001  Methylibium petroleiphilum PM1  Bacteria  normal  0.390021  normal 
 
 
-
 
NC_013204  Elen_2758  transcriptional regulator, LuxR family  35 
 
 
523 aa  49.7  0.0001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2696  transcriptional regulator, LuxR family  35.38 
 
 
535 aa  49.7  0.0001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_3038  transcriptional regulator, LuxR family  35.48 
 
 
569 aa  49.7  0.0001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2775  transcriptional regulator, LuxR family  24.42 
 
 
481 aa  49.7  0.0001  Eggerthella lenta DSM 2243  Bacteria  normal  0.257993  normal  0.934511 
 
 
-
 
NC_013204  Elen_0597  transcriptional regulator, LuxR family  30.67 
 
 
493 aa  50.1  0.0001  Eggerthella lenta DSM 2243  Bacteria  normal  0.882562  normal 
 
 
-
 
NC_013204  Elen_0976  transcriptional regulator, LuxR family  37.1 
 
 
501 aa  49.7  0.0001  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.018057 
 
 
-
 
NC_013165  Shel_02650  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  27.27 
 
 
505 aa  48.9  0.0002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_27360  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  32.35 
 
 
517 aa  48.9  0.0002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0445329  normal 
 
 
-
 
NC_013170  Ccur_10150  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  34.25 
 
 
483 aa  49.3  0.0002  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.906615  hitchhiker  0.00359447 
 
 
-
 
NC_013204  Elen_0171  transcriptional regulator, LuxR family  37.04 
 
 
484 aa  49.3  0.0002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0392  transcriptional regulator, LuxR family  34.25 
 
 
529 aa  48.9  0.0002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0606  transcriptional regulator, LuxR family  32.79 
 
 
506 aa  48.5  0.0002  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.290399 
 
 
-
 
NC_013204  Elen_0992  transcriptional regulator, LuxR family  35.38 
 
 
493 aa  48.9  0.0002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1837  transcriptional regulator, LuxR family  29.85 
 
 
487 aa  48.5  0.0003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4619  two component transcriptional regulator, LuxR family  37.37 
 
 
226 aa  48.5  0.0003  Methylobacterium populi BJ001  Bacteria  normal  0.167951  normal  0.786248 
 
 
-
 
NC_013165  Shel_25010  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  34.48 
 
 
484 aa  48.1  0.0003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_26890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  35 
 
 
515 aa  48.1  0.0003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0133  transcriptional regulator, LuxR family  38.33 
 
 
480 aa  48.5  0.0003  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.384824 
 
 
-
 
NC_013204  Elen_1015  transcriptional regulator, LuxR family  35.48 
 
 
509 aa  48.1  0.0003  Eggerthella lenta DSM 2243  Bacteria  normal  0.221092  normal  0.129145 
 
 
-
 
NC_013204  Elen_2762  ATP-dependent transcriptional regulator, MalT- like, LuxR family  38.24 
 
 
520 aa  47.8  0.0004  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_0981  two component transcriptional regulator, LuxR family  39.06 
 
 
221 aa  47.8  0.0004  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.416641 
 
 
-
 
NC_013165  Shel_00820  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  39.66 
 
 
320 aa  47.8  0.0004  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_05580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  31.25 
 
 
512 aa  47.8  0.0004  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.735856  normal 
 
 
-
 
NC_013165  Shel_16610  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  29.69 
 
 
491 aa  48.1  0.0004  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0119595  normal  0.714327 
 
 
-
 
NC_013170  Ccur_06630  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  32.69 
 
 
215 aa  47.8  0.0004  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.252447  normal  0.303532 
 
 
-
 
NC_013204  Elen_0123  transcriptional regulator, LuxR family  33.33 
 
 
492 aa  48.1  0.0004  Eggerthella lenta DSM 2243  Bacteria  normal  0.891774  normal 
 
 
-
 
NC_013204  Elen_2786  transcriptional regulator, LuxR family  23.12 
 
 
511 aa  47.8  0.0005  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.0490323 
 
 
-
 
NC_013204  Elen_1291  transcriptional regulator, LuxR family  29.87 
 
 
300 aa  47.8  0.0005  Eggerthella lenta DSM 2243  Bacteria  normal  0.979242  normal 
 
 
-
 
NC_013165  Shel_12520  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  32.5 
 
 
320 aa  47.8  0.0005  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.816981 
 
 
-
 
NC_013204  Elen_1431  transcriptional regulator, LuxR family  33.87 
 
 
498 aa  47.4  0.0006  Eggerthella lenta DSM 2243  Bacteria  normal  0.0577596  normal  0.857351 
 
 
-
 
NC_013235  Namu_2913  transcriptional regulator, LuxR family  38.89 
 
 
356 aa  47.4  0.0006  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000129888  hitchhiker  0.0000689146 
 
 
-
 
NC_012793  GWCH70_0367  transcriptional regulator, LuxR family  34.29 
 
 
556 aa  47.4  0.0006  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_0630  transcriptional regulator, LuxR family  31.15 
 
 
528 aa  47.4  0.0006  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2655  transcriptional regulator, LuxR family  32.43 
 
 
470 aa  47  0.0007  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.149331 
 
 
-
 
NC_010172  Mext_4137  response regulator receiver  37.37 
 
 
225 aa  47.4  0.0007  Methylobacterium extorquens PA1  Bacteria  normal  0.218362  normal 
 
 
-
 
NC_011757  Mchl_4505  two component transcriptional regulator, LuxR family  37.37 
 
 
225 aa  47.4  0.0007  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.782253  normal 
 
 
-
 
NC_013165  Shel_22730  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  30.26 
 
 
502 aa  47  0.0007  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1290  two component LuxR family transcriptional regulator  37.88 
 
 
209 aa  47  0.0008  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.542915  normal 
 
 
-
 
NC_013165  Shel_06100  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  32.35 
 
 
518 aa  47  0.0008  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.603093 
 
 
-
 
NC_013204  Elen_2932  transcriptional regulator, LuxR family  34.29 
 
 
492 aa  46.6  0.001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_1701  two component LuxR family transcriptional regulator  29.55 
 
 
201 aa  46.6  0.001  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0166117  n/a   
 
 
-
 
NC_008255  CHU_1317  response regulator  32.81 
 
 
220 aa  46.6  0.001  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_008578  Acel_1390  two component LuxR family transcriptional regulator  39.29 
 
 
225 aa  46.2  0.001  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2948  response regulator receiver protein  34.78 
 
 
221 aa  46.2  0.001  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.126231 
 
 
-
 
NC_013165  Shel_06810  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  30 
 
 
520 aa  46.6  0.001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.521043 
 
 
-
 
NC_013165  Shel_24540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  29.79 
 
 
536 aa  46.6  0.001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_02050  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  31.15 
 
 
541 aa  46.6  0.001  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0184  transcriptional regulator, LuxR family  31.15 
 
 
507 aa  46.2  0.001  Eggerthella lenta DSM 2243  Bacteria  normal  0.131926  normal 
 
 
-
 
NC_009253  Dred_1864  two component LuxR family transcriptional regulator  37.5 
 
 
205 aa  45.8  0.002  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_2353  transcriptional regulator, LuxR family  40.32 
 
 
516 aa  45.8  0.002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6351  two component LuxR family transcriptional regulator  26.58 
 
 
244 aa  45.4  0.002  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_23170  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  31.82 
 
 
474 aa  45.4  0.002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.23412 
 
 
-
 
NC_013204  Elen_0167  transcriptional regulator, LuxR family  32.79 
 
 
493 aa  45.8  0.002  Eggerthella lenta DSM 2243  Bacteria  normal  0.165739  normal 
 
 
-
 
NC_013739  Cwoe_1523  ATP-dependent transcriptional regulator, MalT- like, LuxR family  37.93 
 
 
873 aa  45.4  0.002  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0368  transcriptional regulator, LuxR family  26.15 
 
 
516 aa  45.8  0.002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0436  transcriptional regulator, LuxR family  32.26 
 
 
501 aa  45.8  0.002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2925  transcriptional regulator, LuxR family  29.51 
 
 
517 aa  45.4  0.002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_11580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  29.69 
 
 
515 aa  44.7  0.003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.937657  normal 
 
 
-
 
NC_013170  Ccur_00480  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  33.33 
 
 
606 aa  44.7  0.003  Cryptobacterium curtum DSM 15641  Bacteria  decreased coverage  0.00118843  normal 
 
 
-
 
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