| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_2816 |
|---|
| Symbol | |
|---|
| ID | 8417144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 3263512 |
|---|
| End bp | 3264927 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645025793 |
|---|
| Product | transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_003183152 |
|---|
| Protein GI | 257792546 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.138304 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.00338242 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAGG TACGGAACAC CATCAACGCG ACGTGGGTTC GCTGTCTCGT CGCGTTGATC
GCCGAGCTGT TCGGCACATG GCTGACCAAC GCGGCGCTGT ATCCGCAGTA CATCGGCGTC
ATGTCCGAGG CGCGCGACGC GTCGTCGCTC GTGGGCGTGG TAACGCTCGT GGCGCTGGCG
GTGTGGGCGC TCAAGAAGCC CTCGTCCATC AACGAGACCA CCCTGACGGC GGGCTCGTTC
GTGCTGTACT CGGCGGGGTT CGCGCTCATC GTGCTGGGCA TCGCGCAGCA ATCGGCTCCC
CTGCTGCTGG CGGGTGCGTG CGTGCGCTCG GTCGGGTCGC GCTGGGTGGT GGTGCTCATG
GGCATCTCGC TGTGCAAGCT CGACAAACGC TCGTGCATGC TGTGCATCGC GTCGGCCCTG
GTGGCAAGCT ACCTGCTGCG ACTTCCGTAC ATGGGCGCCG ACGCGACGGT GAGCATGGCC
ACGCTGTTCC TGCTGCCGTT CATCATGTAC GCCGCGTGCC GCCCGCTGGC GCTCGACATG
CTCGCCGTCA TCCGCGAGGC GGTGCCGCCG GCGGAGACGT CCATCACGCA GCCTGCGTCG
TTCGTGCCGT TCGCGCACGG GCTGTTCGTG GCCATCTTCA TCTTCCGCAT CGCGTACGGG
TTCGCGTTGA CGTTCGGCTC GATCGACGGT AATCCCCAGC AGACGTTCTT CGGCTTGATG
CCCATCGCCA TCCTCTTGGT CATGGCCCTG CTGCCGAAGG TGCCGAAAGC GGATGTGTTG
TACCAGGCCG CAGCGCTGTT CGTGGTGGGC GGATTCCTCG CGGTGGTGGT GCTCGTGGGC
CGCGCGCCCG GCGACATGGC GTTCGCGAAC GGGCTGCTGT ACGCGGGCAG CGAGTGCTTC
GATGCGCTCA TGTGGTTCGT GCTGGCCTCC ATCGGCGCGC GCAACAAGGT GAACGCGCTG
GCCGTGTTCG CGTGGGGACG CGCGGCCTCG TCGGCGGGCC TGCTGTGCGG CGCGACGGTG
GGGCATGCGG TGAACGCCAC TCCCGACCCG CTGACGGTGT CGGTGGGCAT CGCGGTGGTG
CTGTTCCTGT TCGTGGCGAT GAACTTCACG GTGCTCAAGC CGTTCGGCTT CCAGGCAACC
ATCGATGGCG TGCAGTCGGT TGAGCCCGTC GCGGCGGCGG CCTCGGTGGG GCTGCCGGAG
AAAAGCGCCG CCGTGGCCGC GCGGTACCGG CTGACGCCGC GCGAGACCGA GCTGCTCGAG
CTGCTGGCGC ACGGGCGCAA CGGGCCGTTC ATCCAGGAGA GGCTCGTGCT GTCGCGCAAC
ACGGTGAAGA CGCACGTGGC GAACATCTAC GGCAAGCTGG GGGTTCATTC GCAGCAGGAG
CTCATCGATC TGGTGGAGGA GGCCGACGAT CGATAG
|
|---|
| Protein sequence | MIEVRNTINA TWVRCLVALI AELFGTWLTN AALYPQYIGV MSEARDASSL VGVVTLVALA
VWALKKPSSI NETTLTAGSF VLYSAGFALI VLGIAQQSAP LLLAGACVRS VGSRWVVVLM
GISLCKLDKR SCMLCIASAL VASYLLRLPY MGADATVSMA TLFLLPFIMY AACRPLALDM
LAVIREAVPP AETSITQPAS FVPFAHGLFV AIFIFRIAYG FALTFGSIDG NPQQTFFGLM
PIAILLVMAL LPKVPKADVL YQAAALFVVG GFLAVVVLVG RAPGDMAFAN GLLYAGSECF
DALMWFVLAS IGARNKVNAL AVFAWGRAAS SAGLLCGATV GHAVNATPDP LTVSVGIAVV
LFLFVAMNFT VLKPFGFQAT IDGVQSVEPV AAAASVGLPE KSAAVAARYR LTPRETELLE
LLAHGRNGPF IQERLVLSRN TVKTHVANIY GKLGVHSQQE LIDLVEEADD R
|
|---|
| |