Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_0421 |
Symbol | |
ID | 8414705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | - |
Start bp | 539315 |
End bp | 540973 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645023396 |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_003180799 |
Protein GI | 257790193 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0413788 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00000000225621 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTGCGAAA CCGCTATCGG ATTCCCCCGC ATTCGCGCCA GCGCCCCCGC TATACTGATG CAGGGGATAT TCTACCCGTC GAAGGCTATC ATCCAGGGGA GGATCGTAGT GAACGCGACG ACCGTACTGC GCGCTTTCAA ACCGAATACC ACGCTGTTCG GCTATGCGTC GTTCCTTGCC GTGAATGCCG CCGGAGCGTG GGGCGGCGTG TTCCCGTTCT TGCCGATGAA GCTTCAAGAA CCGCAGACGC TGTTCTGGTT CTTCCTCGTG CAGTCGCTCG TGTTCGCCGC CTGCTTCTTT TTGAGCGTAG TAGGCTCGTA CCATCTGCCG GGGCCCACGC GCTTGTTCAT CGTCAGGTTG TCGGCCGTGC CGTATCTGCT GGGATGGTTC TGCCTTATCG GCGCCATGTA TCTGGACGCA TGGACGCTGC CCCTCGTCAT CGCGGGCGGC GGGTTCATCG GCGTGGGATC GGCCGGTTTC TACATGCTGT GGCAACGACT GTTCGCAAGC CAGGACTCGG ACGCGGGCAA CCATGACCTC ATCCTCGGCA CCGCGTACGC TTCGGTGCTA TACTTCGCGC TGCACCTCAT CCCCCGCGCA GTCACCGTGT ACCTGATTCC TCTGGTTATC ACACCGTTTT TCGCTCTGGC GATATCGTTG AAGAGCCGCG AGATCAATTT CGACCAGCCC ATGTTCGAGG ACGTGCCGAA GAAGAACAGA GGCGTGTACC GCCAGGCAAT CTCCACCCTT GCGCGCCCGG CGCTGTGCGT GGGCTCACTC GGGTTGTGCG CGGGGCTCAT CCGCGCGCTG GCCATCGACG ATCCGGCCAT CGGATCGCTG GTGAACGCGT TGTCTATGGG CGCATCGCTG GTTACCGCCG TCGCGTTCAT GGTGCTGTGG CAGTTCAAGA GCGTGCGGCT CAACGTAGTT TCGCTGTTCC GCATCGTGTT TCCGGTGATC ATCACCGGAT TCGTGCTGCT CCCGTTTCTG GGCGACGTCT ACGCCCGTTG GCTCGCGGCC GTCTTGTACG CGGCGTACAG CGTCACCATC ATGCTCATGA TGATCCAATG TGCCCAGTCG TCGCGCGACC ACGGGACGAA CCCCGTGTTC GTGTACGGGT TCTTCGGCGG CGTGGTGTAC GCCTTGCACG ATGCAGGGTT CATCGGCGGA ACGCTTGCGG GACAGGTGGC CATTCCGGGG CTGTCGTCGC ACGCTGTGGT TGCGCTCGGC GCCGGGTACC TGCTGGGATT CATGTACTTC TTCGGCCAGG GCGGCTTCCA TAGCGCCTTG CGCGGCGCAC ATCGATCGGT TCCGGACGTC GAGCTCGTGT CACTGGGACC GACGCCCGAC GGTTCCGCAA AGCGAGAGGG AACCGTCCGA CCAGCTCGCA AACATGCCGA TGGCGAGCCT GTTTACCAGG ACCGCATCTC CAAGCAGGCG GCCCGCATCT GCCAGGAGTT CCGCCTGAGC GCACGAGAAG CCGAGGTCAT GGAGCACATC GTGCGCGGCA AGACCGTGGT GCGCATCGCC GAGGAGCTGG TGATCTCCGA GAACACCGTG CGCATGCATT CGAAGCGCAT CTACGCCAAG CTCGACATCC ACAAAAAGCA GGACCTCATC GACCTCGTAG ACTCGTTCGA CCCCGAACCA GGAAGCTAG
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Protein sequence | MCETAIGFPR IRASAPAILM QGIFYPSKAI IQGRIVVNAT TVLRAFKPNT TLFGYASFLA VNAAGAWGGV FPFLPMKLQE PQTLFWFFLV QSLVFAACFF LSVVGSYHLP GPTRLFIVRL SAVPYLLGWF CLIGAMYLDA WTLPLVIAGG GFIGVGSAGF YMLWQRLFAS QDSDAGNHDL ILGTAYASVL YFALHLIPRA VTVYLIPLVI TPFFALAISL KSREINFDQP MFEDVPKKNR GVYRQAISTL ARPALCVGSL GLCAGLIRAL AIDDPAIGSL VNALSMGASL VTAVAFMVLW QFKSVRLNVV SLFRIVFPVI ITGFVLLPFL GDVYARWLAA VLYAAYSVTI MLMMIQCAQS SRDHGTNPVF VYGFFGGVVY ALHDAGFIGG TLAGQVAIPG LSSHAVVALG AGYLLGFMYF FGQGGFHSAL RGAHRSVPDV ELVSLGPTPD GSAKREGTVR PARKHADGEP VYQDRISKQA ARICQEFRLS AREAEVMEHI VRGKTVVRIA EELVISENTV RMHSKRIYAK LDIHKKQDLI DLVDSFDPEP GS
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