| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_12520 |
|---|
| Symbol | |
|---|
| ID | 8395143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 1438711 |
|---|
| End bp | 1439673 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644986008 |
|---|
| Product | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| Protein accession | YP_003143628 |
|---|
| Protein GI | 257063956 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.816981 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCTTGG CATTTTATTG CTACACCCTT CTTATACTTA CGGCGTGCAT GATGGCGGCA
TCGGTCTGCG CCTCCGCGTT TCTTGTCACG CGTCGTTCGA CCCTTATGAT CGGCGCAGCC
ATGTTTTTGC TCTACATGTT CAAGCTCGCC ATCATCTTCG AAGCCGAGCA CCTATCGCAG
AACATCGCGT TCAATTGGAA CTATTTCTAC AGCATCACGC ACCCATTGCT GCACACGGTG
TTCAGCGCCG GATTCCTCAC GTGCCTTTGG CTCATCATCT GCAGCGAGCT TGACGAAAAG
CGCCCTGGCG TCCTGGCTGT ACCCACCATC GTGTTCTTCG GCGCCCGCAT GTTGTGCGTG
GTTGCAATGA GCGACGGCCC TTGGAAGCAA TGGACGTTCT ATTCGCTGCA TCAAGTTTAT
TTGCTATGGA TTGCTGGGTT CGCTGGCGTG CGGTACTGGC GCACGGAGGA AAAGCAGGCG
CGCATCCACT TGCTGCGCTA CAAGAAATGG TATGTCGCAT TCTGTGTGAT CAGCATCCTT
ATTCTTCTGG AAGACACGAT GAACATCCTG GTTATAAGCC CGAGTCTTTT CACCGAAGAG
TTTTCTCTGT ATTTGAGCGA ACGCAACTTC TTCGACAACG TACTCATCGT CTTCCTGGGC
GCTTTCGCCG TTCTGTCCTC GAGCAAAACG TTGGCGCTAC GCTTCGAAAG GCCACCTTCG
CGCGAGGAAG ATTCCGTTCA GAGGCATATC GACGACCTTC TGCCGCTGTA TGCGAGCCAG
CACGGCCTTT CCAACCGCGA GGCGGAAGTG CTACGGCTGT TGCTTTTGGG CAAAGACAAC
CAGAACATCG CCAACGAGCT CACGCTGGCG CTGGGCACCA TCAAAGCACA TGTCCACAAC
ATCCTGAAAA AGACCGGCCA GCCCGACCGC GAAAGCCTGA AACGCCATTT CTGGAGAGAC
TAA
|
|---|
| Protein sequence | MSLAFYCYTL LILTACMMAA SVCASAFLVT RRSTLMIGAA MFLLYMFKLA IIFEAEHLSQ
NIAFNWNYFY SITHPLLHTV FSAGFLTCLW LIICSELDEK RPGVLAVPTI VFFGARMLCV
VAMSDGPWKQ WTFYSLHQVY LLWIAGFAGV RYWRTEEKQA RIHLLRYKKW YVAFCVISIL
ILLEDTMNIL VISPSLFTEE FSLYLSERNF FDNVLIVFLG AFAVLSSSKT LALRFERPPS
REEDSVQRHI DDLLPLYASQ HGLSNREAEV LRLLLLGKDN QNIANELTLA LGTIKAHVHN
ILKKTGQPDR ESLKRHFWRD
|
|---|
| |