More than 300 homologs were found in PanDaTox collection
for query gene Shel_11580 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013165  Shel_11580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  100 
 
 
515 aa  1051    Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.937657  normal 
 
 
-
 
NC_013165  Shel_06100  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.37 
 
 
518 aa  77.4  0.0000000000006  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.603093 
 
 
-
 
NC_013204  Elen_2779  transcriptional regulator, LuxR family  35.71 
 
 
505 aa  75.5  0.000000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.980405 
 
 
-
 
NC_013204  Elen_0615  transcriptional regulator, LuxR family  37.5 
 
 
462 aa  75.1  0.000000000003  Eggerthella lenta DSM 2243  Bacteria  unclonable  0.000000110739  normal 
 
 
-
 
NC_013204  Elen_2655  transcriptional regulator, LuxR family  45.45 
 
 
470 aa  75.1  0.000000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.149331 
 
 
-
 
NC_013204  Elen_0123  transcriptional regulator, LuxR family  40 
 
 
492 aa  74.3  0.000000000004  Eggerthella lenta DSM 2243  Bacteria  normal  0.891774  normal 
 
 
-
 
NC_013170  Ccur_03610  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  46.27 
 
 
470 aa  73.6  0.000000000009  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.166414  normal  0.0491532 
 
 
-
 
NC_013204  Elen_0436  transcriptional regulator, LuxR family  37.63 
 
 
501 aa  72.8  0.00000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0630  transcriptional regulator, LuxR family  46.38 
 
 
528 aa  73.2  0.00000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_13650  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  43.66 
 
 
464 aa  72.4  0.00000000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0167  transcriptional regulator, LuxR family  43.06 
 
 
493 aa  72.4  0.00000000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.165739  normal 
 
 
-
 
NC_013204  Elen_0531  transcriptional regulator, LuxR family  35.58 
 
 
529 aa  72.4  0.00000000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.614613  normal  0.848046 
 
 
-
 
NC_013165  Shel_06810  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  31.29 
 
 
520 aa  71.6  0.00000000003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.521043 
 
 
-
 
NC_013204  Elen_1592  transcriptional regulator, LuxR family  37.25 
 
 
518 aa  71.2  0.00000000005  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.000355637 
 
 
-
 
NC_013204  Elen_2696  transcriptional regulator, LuxR family  42.5 
 
 
535 aa  70.5  0.00000000006  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_01760  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  35.42 
 
 
546 aa  70.9  0.00000000006  Cryptobacterium curtum DSM 15641  Bacteria  normal  hitchhiker  0.0000265618 
 
 
-
 
NC_013165  Shel_22730  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  37.35 
 
 
502 aa  70.1  0.00000000008  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2258  transcriptional regulator, LuxR family  25 
 
 
476 aa  70.1  0.00000000009  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1837  transcriptional regulator, LuxR family  38.96 
 
 
487 aa  70.1  0.0000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0184  transcriptional regulator, LuxR family  41.77 
 
 
507 aa  69.7  0.0000000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.131926  normal 
 
 
-
 
NC_013204  Elen_0289  transcriptional regulator, LuxR family  36.47 
 
 
498 aa  68.9  0.0000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.797409 
 
 
-
 
NC_013204  Elen_2929  transcriptional regulator, LuxR family  42.25 
 
 
462 aa  68.9  0.0000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0133  transcriptional regulator, LuxR family  36.08 
 
 
480 aa  69.3  0.0000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.384824 
 
 
-
 
NC_013204  Elen_0520  transcriptional regulator, LuxR family  45.07 
 
 
520 aa  68.2  0.0000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.1412 
 
 
-
 
NC_013204  Elen_2812  transcriptional regulator, LuxR family  41.43 
 
 
522 aa  68.6  0.0000000003  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.000674561  hitchhiker  0.0000653029 
 
 
-
 
NC_013204  Elen_2108  transcriptional regulator, LuxR family  40.85 
 
 
516 aa  68.2  0.0000000004  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.00926757  normal  0.183235 
 
 
-
 
NC_013204  Elen_1008  transcriptional regulator, LuxR family  49.23 
 
 
495 aa  68.2  0.0000000004  Eggerthella lenta DSM 2243  Bacteria  normal  0.831923  normal  0.0679507 
 
 
-
 
NC_013204  Elen_0445  transcriptional regulator, LuxR family  38.96 
 
 
534 aa  67.8  0.0000000005  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_03730  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  31.85 
 
 
426 aa  67.4  0.0000000006  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.532687  normal 
 
 
-
 
NC_013170  Ccur_08650  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  46.27 
 
 
508 aa  67.4  0.0000000006  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.197798  normal  0.463051 
 
 
-
 
NC_013204  Elen_1389  transcriptional regulator, LuxR family  39.73 
 
 
478 aa  67  0.0000000007  Eggerthella lenta DSM 2243  Bacteria  normal  0.544965  normal 
 
 
-
 
NC_013204  Elen_2532  transcriptional regulator, LuxR family  49.23 
 
 
500 aa  66.6  0.0000000009  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_16610  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  29.63 
 
 
491 aa  66.6  0.000000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0119595  normal  0.714327 
 
 
-
 
NC_013204  Elen_0523  transcriptional regulator, LuxR family  44.78 
 
 
511 aa  66.6  0.000000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.500884  normal  0.253762 
 
 
-
 
NC_013204  Elen_0597  transcriptional regulator, LuxR family  44.16 
 
 
493 aa  66.2  0.000000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.882562  normal 
 
 
-
 
NC_013204  Elen_0500  transcriptional regulator, LuxR family  36.36 
 
 
487 aa  66.2  0.000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.472786 
 
 
-
 
NC_013204  Elen_0368  transcriptional regulator, LuxR family  24.42 
 
 
516 aa  66.6  0.000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_12700  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  36.73 
 
 
488 aa  66.6  0.000000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0461  transcriptional regulator, LuxR family  28.86 
 
 
542 aa  65.5  0.000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2816  transcriptional regulator, LuxR family  40.26 
 
 
471 aa  65.9  0.000000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.138304  hitchhiker  0.00338242 
 
 
-
 
NC_013204  Elen_2786  transcriptional regulator, LuxR family  35.59 
 
 
511 aa  65.5  0.000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.0490323 
 
 
-
 
NC_013170  Ccur_12490  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  27.61 
 
 
560 aa  65.9  0.000000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2699  transcriptional regulator, LuxR family  35 
 
 
478 aa  65.5  0.000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2824  transcriptional regulator, LuxR family  41.18 
 
 
550 aa  65.1  0.000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0506  transcriptional regulator, LuxR family  32.14 
 
 
519 aa  64.7  0.000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.274884 
 
 
-
 
NC_013204  Elen_0496  transcriptional regulator, LuxR family  34.88 
 
 
510 aa  64.3  0.000000005  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.484054 
 
 
-
 
NC_013204  Elen_2932  transcriptional regulator, LuxR family  39.71 
 
 
492 aa  63.9  0.000000007  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0578  transcriptional regulator, LuxR family  41.18 
 
 
474 aa  63.9  0.000000007  Eggerthella lenta DSM 2243  Bacteria  normal  0.28219  normal 
 
 
-
 
NC_013204  Elen_2688  transcriptional regulator, LuxR family  36.9 
 
 
470 aa  63.5  0.000000008  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0181  transcriptional regulator, LuxR family  35.54 
 
 
600 aa  63.5  0.000000009  Eggerthella lenta DSM 2243  Bacteria  normal  0.294561  normal 
 
 
-
 
NC_013204  Elen_0514  transcriptional regulator, LuxR family  40.54 
 
 
493 aa  63.5  0.000000009  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.559597 
 
 
-
 
NC_013165  Shel_23170  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  41.79 
 
 
474 aa  62.8  0.00000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.23412 
 
 
-
 
NC_013204  Elen_2290  transcriptional regulator, LuxR family  43.28 
 
 
493 aa  63.2  0.00000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.10968  normal 
 
 
-
 
NC_013204  Elen_2723  transcriptional regulator, LuxR family  37.68 
 
 
509 aa  63.2  0.00000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.397924  normal 
 
 
-
 
NC_013165  Shel_26890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  32.74 
 
 
515 aa  63.2  0.00000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0440  transcriptional regulator, LuxR family  26.53 
 
 
526 aa  62.4  0.00000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0421  transcriptional regulator, LuxR family  32 
 
 
552 aa  62  0.00000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.0413788  hitchhiker  0.00000000225621 
 
 
-
 
NC_013165  Shel_20840  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  31.25 
 
 
524 aa  62.4  0.00000002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.982335  normal 
 
 
-
 
NC_013204  Elen_0171  transcriptional regulator, LuxR family  40.85 
 
 
484 aa  62.4  0.00000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0108  transcriptional regulator, LuxR family  42.03 
 
 
493 aa  62.4  0.00000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.44109  normal 
 
 
-
 
NC_013204  Elen_2758  transcriptional regulator, LuxR family  34.02 
 
 
523 aa  62.4  0.00000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2775  transcriptional regulator, LuxR family  43.84 
 
 
481 aa  62  0.00000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.257993  normal  0.934511 
 
 
-
 
NC_013501  Rmar_2437  two component transcriptional regulator, LuxR family  44.59 
 
 
218 aa  62  0.00000003  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_00480  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  41.79 
 
 
606 aa  61.2  0.00000004  Cryptobacterium curtum DSM 15641  Bacteria  decreased coverage  0.00118843  normal 
 
 
-
 
NC_013204  Elen_0269  transcriptional regulator, LuxR family  36.59 
 
 
499 aa  61.6  0.00000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1093  transcriptional regulator, LuxR family  34.25 
 
 
505 aa  60.8  0.00000005  Eggerthella lenta DSM 2243  Bacteria  normal  0.569375  hitchhiker  0.0000000000000377381 
 
 
-
 
NC_013204  Elen_0406  transcriptional regulator, LuxR family  31.3 
 
 
486 aa  60.8  0.00000006  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.0269651 
 
 
-
 
NC_013204  Elen_0364  transcriptional regulator, LuxR family  40.23 
 
 
494 aa  60.5  0.00000007  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.723912 
 
 
-
 
NC_013170  Ccur_13460  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  50 
 
 
472 aa  60.5  0.00000008  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_02650  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  29.13 
 
 
505 aa  60.1  0.00000009  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_010644  Emin_0306  two component LuxR family transcriptional regulator  50 
 
 
215 aa  60.1  0.00000009  Elusimicrobium minutum Pei191  Bacteria  unclonable  0.000000000161342  hitchhiker  0.00000159266 
 
 
-
 
NC_013170  Ccur_13550  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  38.81 
 
 
506 aa  60.1  0.00000009  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0518  transcriptional regulator, LuxR family  37.33 
 
 
488 aa  59.7  0.0000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.982453  normal  0.339001 
 
 
-
 
NC_013204  Elen_0485  transcriptional regulator, LuxR family  40.58 
 
 
537 aa  60.1  0.0000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.619389 
 
 
-
 
NC_013204  Elen_0976  transcriptional regulator, LuxR family  40.91 
 
 
501 aa  59.7  0.0000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.018057 
 
 
-
 
NC_013165  Shel_24540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  28.32 
 
 
536 aa  59.3  0.0000002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_13310  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  38.03 
 
 
469 aa  58.9  0.0000002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0175254  normal 
 
 
-
 
NC_013730  Slin_4823  two component transcriptional regulator, LuxR family  42.86 
 
 
214 aa  58.9  0.0000002  Spirosoma linguale DSM 74  Bacteria  normal  0.103693  normal  0.11387 
 
 
-
 
NC_009511  Swit_0502  regulatory protein, LuxR  40.91 
 
 
861 aa  59.3  0.0000002  Sphingomonas wittichii RW1  Bacteria  normal  0.0169233  normal  0.80601 
 
 
-
 
NC_013204  Elen_2353  transcriptional regulator, LuxR family  37.31 
 
 
516 aa  58.5  0.0000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2742  transcriptional regulator, LuxR family  32.94 
 
 
544 aa  58.2  0.0000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_3022  ATP-dependent transcriptional regulator, MalT- like, LuxR family  40.79 
 
 
485 aa  58.5  0.0000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.709367  normal 
 
 
-
 
NC_013204  Elen_2795  transcriptional regulator, LuxR family  44.07 
 
 
468 aa  57.8  0.0000004  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.000289432 
 
 
-
 
NC_013441  Gbro_1936  regulatory protein LuxR  35.44 
 
 
218 aa  58.2  0.0000004  Gordonia bronchialis DSM 43247  Bacteria  normal  0.548655  n/a   
 
 
-
 
NC_013165  Shel_25010  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  37.31 
 
 
484 aa  58.2  0.0000004  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3175  response regulator receiver protein  56.86 
 
 
250 aa  58.2  0.0000004  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.000000721008  normal 
 
 
-
 
NC_013170  Ccur_02050  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  26.34 
 
 
541 aa  57.8  0.0000005  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_05580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  35.48 
 
 
512 aa  57.4  0.0000006  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.735856  normal 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  40 
 
 
213 aa  57.4  0.0000006  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_3188  LuxR family transcriptional regulator  47.27 
 
 
368 aa  57.4  0.0000007  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0110301  n/a   
 
 
-
 
NC_013204  Elen_1015  transcriptional regulator, LuxR family  33.82 
 
 
509 aa  57.4  0.0000007  Eggerthella lenta DSM 2243  Bacteria  normal  0.221092  normal  0.129145 
 
 
-
 
NC_009656  PSPA7_1542  putative transcriptional regulator  43.24 
 
 
262 aa  57  0.0000008  Pseudomonas aeruginosa PA7  Bacteria  normal  0.409159  n/a   
 
 
-
 
NC_013204  Elen_0209  transcriptional regulator, LuxR family  28.3 
 
 
487 aa  57  0.0000008  Eggerthella lenta DSM 2243  Bacteria  normal  0.213353  normal  0.452607 
 
 
-
 
NC_013204  Elen_0617  transcriptional regulator, LuxR family  30 
 
 
505 aa  57  0.0000009  Eggerthella lenta DSM 2243  Bacteria  normal  0.0935525  normal 
 
 
-
 
NC_013131  Caci_3625  transcriptional regulator, LuxR family  46.43 
 
 
925 aa  57  0.0000009  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0992  transcriptional regulator, LuxR family  35.82 
 
 
493 aa  57  0.0000009  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0392  transcriptional regulator, LuxR family  23.72 
 
 
529 aa  57  0.0000009  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013162  Coch_0844  transcriptional regulator, LuxR family  48.28 
 
 
234 aa  56.6  0.0000009  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1954  two component transcriptional regulator, LuxR family  45.45 
 
 
220 aa  56.6  0.000001  Thauera sp. MZ1T  Bacteria  normal  0.228638  n/a   
 
 
-
 
NC_013131  Caci_5781  transcriptional regulator, LuxR family  39.74 
 
 
895 aa  56.6  0.000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
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