| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_2824 |
|---|
| Symbol | |
|---|
| ID | 8417155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 3278771 |
|---|
| End bp | 3280423 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 645025804 |
|---|
| Product | transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_003183160 |
|---|
| Protein GI | 257792554 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTGTGGA AGGCCGGAAT CCTGCATGTT TGCTTCGTGC GCTTCCGACG TTTCCGGTAT
GATGCCCCTA TGAGGGAAAC GGGAGGGAAC AGACAAAAAC AGCCGTCGCG CGCGTGGGCT
CATCCCGCTG TATACTCAGC CGTGGTCATT TTGGGTTTCG GATTGTATCG CGGCGTGAAT
TCGAACGTCT ACCTCTCCGC ATACGCGTTC GTGAAGGCGC CCTTCATGTT CGTGCCCGAT
CTGTTCTTCA ACGTAGTGGT GGCATGTTCC ATCATCGTGT GCTCGGCCGT CGCTGTCACC
CTTGCCTGGA CGGGGCGTCT CAAGGCGAAC ACCATGCCAT ACGTGCTGCC GACGGCATTG
TTGTTGGCGG GGAACCTCGC TGCGTTGCTG GGCGTGATCT TGTCGCTGCC GCCTGATCTA
GCGCTGCTGG TTCCCGGCTT GCTGTACGGT GCGGGCAGCG TCATGCTGTC GCTGTTCTGG
ATCGAGGTGC TCTCGGCGAG CCGGCCCAGC TCCATCGTGG TGCAGATTGC GCTCGGCATG
TTGCTGAACG TGGTGGTTTC CTCGGTGCTA TCTCCGTTGC CCGGAGACGT CCAGATGCGT
TCGAGCTGCG TTTTGCTGCT CGTCTCGGGT CTGTGCGCGT GGTTTGTGCG CCGTCGGTTG
CGAGCCGCTT CCTGCGAGGT GGAAACGCAT AACGAACGGC CGATCGCCGA AACGGTATCC
GCCGAACCTG CCGAAGCGCT TTCTTCGAAA ACTTCCTTGC GGGCTCGTTG GGGCGCGTAT
CGCGATGCAT TTTTGGAGTT GGGCGACTCG CTGGTGGCGT TTTTCGTGCT GGAAGCCGTC
ATCGGGTTGC TCAACAGCTT CATGCTGGCG GGATCCATCG ATTTCGAGGG CTCGGGAGCC
GTGTCGGCTG CGGCCATTGT GGGCGCAATC GTCGTGTTCT GCTTCATCGT GTTCGTTGCG
CATCGCATCC CCAAGGTGTC CACGGTATCG CGTGTGGTCA TGCCCGTGCT CGCGGCCATG
CTGGTGTTCC TGCCGTTTCT CAGCGAGCGC TACAACCTGG TGTTCTCCAT GCTGTTGCTC
GGCAGCTACT ACTTCGTCGC GCTGCTCATC ACCTATCTTA TCGCCGAGGC GGCACAGACG
CGCAAGGTAT CGCCCTACGT GCTGATGGGC GTGGCTATGG GCGTCGCGCG CGTATGCCTG
GCCGTGGCGC TGTTGTCGGG GTACGCGGCC GGGGTCGCCG GCGGCGGTCC GGGCGACGAG
GCCGAGCATA CGATGCGCTA TCTCGTGATC ATCGTCGTGG TGCTGTATGC TCTGTGCATG
GCGCTCGTGT TCTTCTCGCG CGATCGCAAG CGACGACGCG CCGAAGAGGC TTCTGCCGAT
GCGCCGAACG AGAGCGCGGT CGGAACCGAT TCGGTTTCGG TGCCCGAGAT CGACTCGACG
CTTGACGCGT GCTGTGCAAG CGTCGCCCGG GAAGGGGGCT TGACCGAGCG TGAGGCCGAG
ATCCTCGTCT ACCTTGCACG TGGCAGGACG AAGGCGTACA TCGCCGACGC GCTGTTCGTC
ACCGAGAACA CGGTGCGCAG CCATGTGCGC AACATCTATT CCAAGCTCGA CGTGCACACG
CGCCAGGAAC TGCTTGACCT TCTGGAGCGT TGA
|
|---|
| Protein sequence | MLWKAGILHV CFVRFRRFRY DAPMRETGGN RQKQPSRAWA HPAVYSAVVI LGFGLYRGVN
SNVYLSAYAF VKAPFMFVPD LFFNVVVACS IIVCSAVAVT LAWTGRLKAN TMPYVLPTAL
LLAGNLAALL GVILSLPPDL ALLVPGLLYG AGSVMLSLFW IEVLSASRPS SIVVQIALGM
LLNVVVSSVL SPLPGDVQMR SSCVLLLVSG LCAWFVRRRL RAASCEVETH NERPIAETVS
AEPAEALSSK TSLRARWGAY RDAFLELGDS LVAFFVLEAV IGLLNSFMLA GSIDFEGSGA
VSAAAIVGAI VVFCFIVFVA HRIPKVSTVS RVVMPVLAAM LVFLPFLSER YNLVFSMLLL
GSYYFVALLI TYLIAEAAQT RKVSPYVLMG VAMGVARVCL AVALLSGYAA GVAGGGPGDE
AEHTMRYLVI IVVVLYALCM ALVFFSRDRK RRRAEEASAD APNESAVGTD SVSVPEIDST
LDACCASVAR EGGLTEREAE ILVYLARGRT KAYIADALFV TENTVRSHVR NIYSKLDVHT
RQELLDLLER
|
|---|
| |