Gene Elen_0209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0209 
Symbol 
ID8414493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp290839 
End bp292302 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content67% 
IMG OID645023189 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003180592 
Protein GI257789986 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.213353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.452607 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCACG AAACCAAGCC GGAATCCGCG GGCGCGAAAC GCACGCTCGC GGGCAGCGCC 
GTGGGATACG GCATCGTGTG CGGGCTGACG TTCCCCCTCA TGATCTCCAG CACGTTCCTT
CAGGAGATGA GCCTGTCGCA CGGGGCGGGC GATGCGTTCG GCGCACTGTT CTTCCTCGCG
TACGCGCTGA CGATGGCCGG CACCGCGCTG GCCTACGCTC TGCGCCGCAA GCCCACGCGC
CGCGCGCGCA TCGTCAGCGC CTTCGCCGCA GCCTTCCTGG GCAACGCCCT CATGTTCGCG
CGGCTGGTGG GGCTCATCGA GGGCGGCTGG CCGTACGCCA TCGCCGCCTC GAGCCTGATC
GGCTACGGAT TGGCCACCGC CGAGCTTGCA TGGATGGCGC GCATCACCAG CCTACACGAG
CGCGGCCAGG TGTCGCTTGC GCGCACCGTG CCGCTGTCGT TTCTGTGCGG CGGGGCGGTG
GCGGCCGTCA TCTTCGTCGC ATCGGGCACC TTCGAGCTGC TGTTCGCGCT GGCCATCATC
GTGGTTTCGG CGTTGCCGCT TGCGCGCACG GCACCGATGG ATGCAACGGC GCGGCGCGTC
AGCCTCGCGC AGGGCGGCGC GGGCGACTTC GTGAAAGCGG TGTCGTACCT GGCGGTGTTC
TCGTTCGTGT TCGGCGCGGT GAGCCAGGTG GCAACCGTGG TCGAGGAGCC CGTGCCCATC
GCCGCGCAGG CCGTGCTGGA CATCTTGCTG GCAGCCGGCA TCATGCTGGC GTACGTGGTG
CGCAAGAAGC ACGCGTTGTC GGTGGGCGAT TTGTACGACA TCCTGTTCCC CATCGTGGCC
GTGGCGCTGA TCGCGCTGCC GTTCATCACT TCGCCCATCG TGCACGTGAT TGCGGCGGTG
CTCGTGTTCG TGGCGTTCTA CCTGTCGGGC ATGAACGTTC GCATCGCCGT GTGCCTGCTG
GGCGAACGCG ACCACGTATC AATGTGGGTG TACCTGAGCG TTGCGCTGGG GGCGTCGGCG
CTGCTGATCC TCGGAGGCGT CGCGTTCGGC GCGGCGGTGA TCGCGCAGGA TGTGCTGGTG
ACGGGACTCG CGCTCATCTC ACTTGTGTCG CTGTTCGTGC TGGCGCTCAA CCCCATCGTG
GCGAAGCGGC TGGAAACCCG ACGCGCGCAG AAGGAAGCGC CGTCGTCGTC GCCTGTACCC
GAGACGAGCG ACGTGCGCAC GATGCAAGTC GATCTGCTGC GCTCGTTCGC CGCCGCCCAT
GCCCTCACCG CCCGTGAAAC CGACGTGCTG ATCCTGTTGT GCCAAGGCCG CACGCGCACG
TACATCGCCG ACGAGCTGGG GCTGTCGCCG AACACCATCA AGGGCTACAT CCACAACGTG
TACCAGAAGA GCAGCGCCGT CGACAAGCAA GACCTCCTCG ACCGCGTCGA GCTCCACGCG
GAGGGACGCC CGCTGTCGTC CTGA
 
Protein sequence
MQHETKPESA GAKRTLAGSA VGYGIVCGLT FPLMISSTFL QEMSLSHGAG DAFGALFFLA 
YALTMAGTAL AYALRRKPTR RARIVSAFAA AFLGNALMFA RLVGLIEGGW PYAIAASSLI
GYGLATAELA WMARITSLHE RGQVSLARTV PLSFLCGGAV AAVIFVASGT FELLFALAII
VVSALPLART APMDATARRV SLAQGGAGDF VKAVSYLAVF SFVFGAVSQV ATVVEEPVPI
AAQAVLDILL AAGIMLAYVV RKKHALSVGD LYDILFPIVA VALIALPFIT SPIVHVIAAV
LVFVAFYLSG MNVRIAVCLL GERDHVSMWV YLSVALGASA LLILGGVAFG AAVIAQDVLV
TGLALISLVS LFVLALNPIV AKRLETRRAQ KEAPSSSPVP ETSDVRTMQV DLLRSFAAAH
ALTARETDVL ILLCQGRTRT YIADELGLSP NTIKGYIHNV YQKSSAVDKQ DLLDRVELHA
EGRPLSS