Gene Shel_03730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_03730 
Symbol 
ID8394265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp445223 
End bp446503 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content59% 
IMG OID644985138 
Productresponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
Protein accessionYP_003142784 
Protein GI257063112 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.532687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTCTTG CTGCAGGCTC GCTCATGTTC TACCTCGCTT TTTACGGGGA GTATTCCCTA 
GCGTCGGTGG TTGTGGCTGC GATTGTCGTG GGATTTGCGC AGGCGTCGTT CTTCCTCATG
TGGCAGTATT TCTACGCCAA CGAAGGAACG GCCAGGGCAA ACGTATGCAT TCCCGCATCG
GCGGCCCTTT CCATAGTCCT ATGTCTGATT GTGTCCTGGC TTCCCATCGA ATGGACGGTC
CTTTGCGCGG TCATCATCCT TCCTGCGCTG GCTTCGCTGA GCCTTTCCCT CAGCCTGTCC
GAGGTCGAAC CCTACGAGCG CACGCCCCTC TCTGTGCCCG TGGCGGCACA TCTTATATCC
GACACGTGGA AGCCCGTGTT CTGCGTGTGT GCCATCGGCC TCGTGTGGCG CGTGATCGGC
TACTTGGGAG GAGGTGCCGC CGACGGTTTT TCGATTGCCG TCATGGCAGG CATGTCTTGC
GCGGCGCTGC TGGTGTCGGC CATCGAATTG CTTTCGGAGC GGGGCTTCGA CGTGCTGAAC
GTGTACCAAT ATATGTTTCC CCTGGTTACA GGCGCTTTCT TGCTGCCAAC CCTCTTGGGA
ACGCAGTGGT TGGAATTCGT GTATGCCATG ACCATGTTCG GGTTCGAGAT GGTGAACCTC
CTGCTGCTCA TCACATGCGC CGTATATGCC AGCCGTTACG AGCTCGACCC TTCGGTCGTC
TACGCATCCT GCGTAGGCCC CACACTGGTG GCGTTGCTGG TAGGTGACGT GATCGGCATG
CTTCTGACCG ACCGCGCCCT GTTGGACGTA GCCCTGACCG TTGAGCTGCT GTTCGTATGC
GTCTATCTTC TGGCCATGGT GTTGCTGCTG GTCTCGGTGG GACGCAAGGC GTTCACCCGC
CGTACCGTCG AAAAGGCTCC GGAAGACCGC CTCCCTTCCG AATCGGAGGA TCCTTCTTCA
CTTCCGACCG AAACGGCAGG TGCCCAAGCC CCTGACGAGC AGCCCGAAAC AGCATCCGCT
TCCAGCAGAA CCACCCGCGC CTTCGCGCAA ACGCCGGAAC GCGAGCCGCG CCTCGAAGAC
CGTATCGCCG CAATCGAGCA TGCCGAACCG CTGAGCGCCA GAGAGCTCGA AGTGCTGGAC
CTGATTCTCA AGGGCAATAC GGTGGCGGCC GTTTCCCGCA AGCTGTTCAT TTCTGAAAAC
ACGGTACGTG GGCACACCAA GCACATCTAC CGGAAGCTCA GCGTTCATTC CAAACAGGAG
CTCATCGACC TGCTGAACTA G
 
Protein sequence
MLLAAGSLMF YLAFYGEYSL ASVVVAAIVV GFAQASFFLM WQYFYANEGT ARANVCIPAS 
AALSIVLCLI VSWLPIEWTV LCAVIILPAL ASLSLSLSLS EVEPYERTPL SVPVAAHLIS
DTWKPVFCVC AIGLVWRVIG YLGGGAADGF SIAVMAGMSC AALLVSAIEL LSERGFDVLN
VYQYMFPLVT GAFLLPTLLG TQWLEFVYAM TMFGFEMVNL LLLITCAVYA SRYELDPSVV
YASCVGPTLV ALLVGDVIGM LLTDRALLDV ALTVELLFVC VYLLAMVLLL VSVGRKAFTR
RTVEKAPEDR LPSESEDPSS LPTETAGAQA PDEQPETASA SSRTTRAFAQ TPEREPRLED
RIAAIEHAEP LSARELEVLD LILKGNTVAA VSRKLFISEN TVRGHTKHIY RKLSVHSKQE
LIDLLN