| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_0436 |
|---|
| Symbol | |
|---|
| ID | 8414720 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 556071 |
|---|
| End bp | 557576 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 645023409 |
|---|
| Product | transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_003180812 |
|---|
| Protein GI | 257790206 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCACG TCGAAGCACG CGATACCGCA TCCGGCGAGG AGGAGGCCGG TCTTCGGCTG
GGATCCGACG ACCTCGCAAC CTGCGGATCG CTCGCGCTGC TGCTGATTGC GGCTTATTTG
CTGAACGCGT ACATCTTCCC CAGCGTCGCC TTCCTCTTCC CTGCCGGGCG CGAGATTTCC
ACGTACTGCG GGGTGGGGTT CTCCGTCGTA GTCGCGGTCG CGTCGTATCG ACAGCCGGCG
GTGTTTCGCG AGAACCCTTG GTCGCTCACG TGTCTCGGGC TGTTCGCCGT AGGATTGGCC
ATGTTGGGCG CCGGGCTGAT GGCTGACAGC CCTCTGCTTG TCGCGTTGGG CAGCCCGTTC
GGCGGCATCG GATCGGTATG GTTCTCGGTG CTTGTGGGTC TGGCGCTTGT CAAGCTGGGG
ACGAAGCGCA GCATGGTGGT GATCCCCACC GCCTTCGTGG CGAAGTACGC CGTGCAGTTC
GGACTGGTGC TCATGGGCGA CGCGCTGGAC CTTTTGGCGG CGCTCGTGCT GTATTTCGCG
TGCACGACTG CATCGTACTT GCTCATTCGC CCGCGAGTGC ACCGCATGAT CACCGCCATT
CGCGAAAGCG CTTCGCCAAC CGTGCTGGAC GCGACGAACC CCTCGTCGTT CCTGCCGTTC
TCCAGCCTCG TGTACGTGTC CGTCTTCCTG TTCAACGCCG CATGCGGGTA TGCGTTCGGA
AGCCAAGGGC AGATGATGCC GCAAGCTGCC ACGCTGCTGT CGTTCGTCCC GGTCGTCGTG
GTGTTCTTCA TCGTGGTGGC TGCGCGCGCC CGTCTTGTCG CCGATGCGCT GTACCGCGTT
TCGGCGCTGC TCGTGTTCGC GGGATTTCTG TTGGTGCCGC TATCGTTCAA CGGTCTCGAC
AGGCCCGCCG GGTTCCACAT GTCAAGCATG CTGCTGTATG CCGGGTCGGA CTGCTTCAGC
GTGCTCACCT ACTACCTGAT CGCCGCCGTC GGGTCGCGCA ACCCCGCCGG CGCGTTGTCT
ACCTCGGCTT TTGCGATTGC GGCCGGTTGG CTGGGCATCG GCTGCGGCGC GCTGCTGGTG
CAAAGCATCG AAGCGCTCGG CGCGCTCGAC GGCAGCACGC TACTCTGGTC GTCGGCCATC
GTCACGTTTT TGTTCATGAC GTACAACTTC GTGGCTATGC GGGGATTCAG TTTCGAGGAT
GCCATCAAAG GGGTGCGCCC GGCGCATCCG ACACCGGCGC GCGCAGCGGC GGACGAAGCT
GGCGAAGACC CCGACACGTC GCAGCTTGAA GAGTCATGCG AGAACGTGAT CAGGCGGTTC
GGGCTGACCC CGCGCGAAGG CGACGTGTTA CGCCTGCTGG CGCGCGGCAG AACGAGCCCG
GTGATCCAGG AGAAGCTGTT CCTGTCGCAC AACACCGTGA AAACCCACGT CCGCCACATT
TACGCCAAGA TGGACATTCA CTCCCAGCAG GAGCTCATCG ACATCGTGGA AGGCGCGGAC
GCGTAG
|
|---|
| Protein sequence | MRHVEARDTA SGEEEAGLRL GSDDLATCGS LALLLIAAYL LNAYIFPSVA FLFPAGREIS
TYCGVGFSVV VAVASYRQPA VFRENPWSLT CLGLFAVGLA MLGAGLMADS PLLVALGSPF
GGIGSVWFSV LVGLALVKLG TKRSMVVIPT AFVAKYAVQF GLVLMGDALD LLAALVLYFA
CTTASYLLIR PRVHRMITAI RESASPTVLD ATNPSSFLPF SSLVYVSVFL FNAACGYAFG
SQGQMMPQAA TLLSFVPVVV VFFIVVAARA RLVADALYRV SALLVFAGFL LVPLSFNGLD
RPAGFHMSSM LLYAGSDCFS VLTYYLIAAV GSRNPAGALS TSAFAIAAGW LGIGCGALLV
QSIEALGALD GSTLLWSSAI VTFLFMTYNF VAMRGFSFED AIKGVRPAHP TPARAAADEA
GEDPDTSQLE ESCENVIRRF GLTPREGDVL RLLARGRTSP VIQEKLFLSH NTVKTHVRHI
YAKMDIHSQQ ELIDIVEGAD A
|
|---|
| |