| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_2775 |
|---|
| Symbol | |
|---|
| ID | 8417101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 3219328 |
|---|
| End bp | 3220773 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645025750 |
|---|
| Product | transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_003183111 |
|---|
| Protein GI | 257792505 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.257993 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.934511 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGACA GCCGCTACAC AACGCAGGCA GCAGACTACC GCCGGTTCTT CGTCAACGGT
CGGACGCTGG CGCTTGCGCT GGGATACGGG CTGTTCCGGG GCGCCAATTC CCTGCTGTAC
TCTTCGGCGC TCGCTTCGGT TCCCACGTCC ACGCTGTTCA TCGCCGACAT GTCGTTCTCC
ATGACAACCG CGCTGTCGTC GCTGCTGTGC GCGCTCGCGG TGATGGCGCT TGCGTGGAAG
GGCCTCATTC TCGGCTTCCG CCTGCCCGTG GTGCTGCCGG CACTGCTGCT GCTCCTGGTT
GCCGCCCCCG CCGTGGCTCC TTGGATCGCC CCCGGCTCAT CGGGGGTGTT CGTGCTCCTG
GCGCTGACGT ACGGCGTTGC ATCGACGTGC TTGAACCTCT CGTGGCTTGA GGTGGTGGCC
CATCAGACGC CGGCGCGGAT CGCGGGCATC CTAGCGCTGG GCATGCTGGT GAAAAGCGTG
ATCACGTTGG CGTGCGGCAG CCTCATGGGC GTGCCGTTCG TCGTCGCGGT GGGCGTGCTG
CTCGTCGGCG CGGTCGCGTT GCTGCTGCGC GCGAGGGGCC GCGCGTGGCT CGATTCCTCC
GAAGACGACG CGGCGCCCGC GACGTTCAAG GCGTATCGCC AGGGCGCGAT GGGAATCGCC
GACGCGTTGG TGGTCTCGAT CGTCCTCGAG GCGACGGTGA GCATCCTCAA CGGGTTCTTC
CTCGGCGTCG CCACCGACGG GTCGGGCATC ATCTCCGCCG TCGGGGCCAT TTCGGCGGCG
CTCGTGTTCT GCTTCGTCGT GGTCGTCGTC GCCCGCGCGG TGGACGTGGA GCGGCTGTAC
CGCTATCTGT TCCCGATACT GCTGGCGCTG GTGGTGCTGC TGCCGCTCAC GCTGGGAAGC
TGGGCTTCGC AAGCGCTCCA GGGCCTGCTG GTGCTCGTGT ACGAGTTCAT CTCGTTCAGC
GCGCTGTACT TCATCCTGTG CCAGATACAG TGGAAGAAGC TCAAGACGTA CGTGCTGTTC
GCGTTCGCCA CGGCGTGCAT CCGCCTGTCG CAGCTGCTGT TCGGCATGGC GGGCTATTGG
CTGGGAGGAG CGTCGGGCAG CGAGGCCGAG GGTTTGTACT GGATCGTCAC CATCGCGGCG
GTGTACGGGC TTTCCATGCT GCTGCTGTAC CTGACGCGGC GGCGACCGTC GACCGACGAG
AAGCGCGTGA TCGTGGTCAC CGAGGAGGAT CGTTTCGCGG CGCGCGCCGA AGAGCTGGCG
GCCGAATACC GCATCACGGC GCGCGAGTCG GAGATCATGC TGCAGCTTGC GCGGGGCCGC
TCGGCCGCGT TCATCGCCGA CGAGCTGGTG TGCTCGCCCG CGACGGTGCG CACGCACATG
AAGAACATCT ACGCGAAGCT CGGCGTGCAT TCGAAGCAGG AGCTCATCGA CCTGTTCGCC
GACTGA
|
|---|
| Protein sequence | MQDSRYTTQA ADYRRFFVNG RTLALALGYG LFRGANSLLY SSALASVPTS TLFIADMSFS
MTTALSSLLC ALAVMALAWK GLILGFRLPV VLPALLLLLV AAPAVAPWIA PGSSGVFVLL
ALTYGVASTC LNLSWLEVVA HQTPARIAGI LALGMLVKSV ITLACGSLMG VPFVVAVGVL
LVGAVALLLR ARGRAWLDSS EDDAAPATFK AYRQGAMGIA DALVVSIVLE ATVSILNGFF
LGVATDGSGI ISAVGAISAA LVFCFVVVVV ARAVDVERLY RYLFPILLAL VVLLPLTLGS
WASQALQGLL VLVYEFISFS ALYFILCQIQ WKKLKTYVLF AFATACIRLS QLLFGMAGYW
LGGASGSEAE GLYWIVTIAA VYGLSMLLLY LTRRRPSTDE KRVIVVTEED RFAARAEELA
AEYRITARES EIMLQLARGR SAAFIADELV CSPATVRTHM KNIYAKLGVH SKQELIDLFA
D
|
|---|
| |