| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_05580 |
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| Symbol | |
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| ID | 8394450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 645988 |
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| End bp | 647526 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644985320 |
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| Product | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| Protein accession | YP_003142966 |
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| Protein GI | 257063294 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.735856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAAGA CCCGCATTGT CACGCAATTG GCAGCCTCAT GCCCAAGCAT GGCGGCCATC
GCATTCGGTT TCTGGCTCGC TTGGTCGCGC ATGGTCTTCG ACGGTATGGT TTGGATTTCC
ACGCCCGACT ACAGCTCTAC AGCCGTAACG CGCATGTACA CCGAAACAAC CATCGCCCTG
GCCGTTGCGC TCATCTTTAT CGGCTTCAAC GCGAAGCGCC TTTCAGGCCT AGCTGACAGG
CAGTCCACCC CGTTGCTCAG CGGTGCATTT TCGTCGATCG GCTGCCTGCT GATTATTCTT
GCCGGACCGT ATTTCCTGCA ACGCGCGGTC GGCGCAGACA CATGGAGCGC CGTTTTTATC
GCTGGATGCG TTATGACGGG CATGGGGTTT GCACCCATCC TGGTCGAATG TGGAAAGTCC
TTCGGCCGGC TTCTGCCCCG CAACGCCATT CTGCAGATGG CGTTCACCTA TTTCATCTGC
GTGGGAACGT ATTTCGTTGC GCTGGGATTT CCTCAATGGA GGCTTTTCGA CGACGGCCCG
CAGGTCTTAG GCACCGCAAT GCTCATTCTG CTGCCGCTGC TTTCGGGACT GTTCGTGTCC
ATCAGCATGT ATGCGCCCGT TTCCGAAACT ACCCGGCAGC CGTCTTTCGA TTTCGAGCAT
TTCCCCAAAC CGTTGTGGAA GCTGGTCGCA TCTGTTTCCA TTCTTGCCTT TGCCGCTGCA
GTGGTGCAAG GCTGGGCCAG CACGTTGGTT GCCCTGTACA ACACCGTGCT TCTGTCGTCT
TTCGTGCTGC TGTTCCAGGT GCCGGCGGCT GCGTCCTTCG TGCTGCTGGC AGTTGGATCC
GATACGGAAA ACGTCAACTT CGGCCGCATC TTCACCATGG TCATGGTGGT TGCCGGGTTC
TTTGTCGCAC TTGCGCCCGT AGTTGGCATC AACAACCACG CCTTCTACCA AACGGTGCCG
TTCAGCATGC GCATCTTCGA CTTCGTGTAT TGCTGCCTGC TGTTCTTCGT CGTGTATCAA
CGGAGGATTT CCGCCATGAT CGTCGTTGGC ATCGGAGTCG GCTTCTACCA GGCGTTTAGC
GCTGCAGGCT GGGCAGTGGG CGCCTATCTG CTGCCTATGA TTTCGAGCTC CATGGTCACG
CAGGGCATTT TCGTCGGGCT TTCGTTCCTC ACCCTGTTCG CCGCTTTCAT GATCTTCTCC
GAGAAAGAGT TCAAGCAGCT CTACGAGGAG CGCGTCGAGG GTCAGACTCC CCTGTCCGAC
CTGCTGAAGA AGCGCATCGA TTCCTCCGTC GCCATCGAAA CGCACCGCGG CAAGTTCAAC
ATCGCCATCG ATTTCATCGC CGACGAGTTC AAGCTGTCCC GCCGCGAGAA GGACGTGCTG
CGCTACCTGG CCATGGGCTA CGGATCCTCG AAGGTGGCCG ACGAGATGGG CATCAGCTGG
AACACCGTGC GCACCCACAC GCGCAACCTA TACGGCAAGC TGGACGTTCA CAGCAAAGAC
GACCTGATGG CTCTGGTTGA CCGCTATCGC GACATGTAG
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| Protein sequence | MPKTRIVTQL AASCPSMAAI AFGFWLAWSR MVFDGMVWIS TPDYSSTAVT RMYTETTIAL
AVALIFIGFN AKRLSGLADR QSTPLLSGAF SSIGCLLIIL AGPYFLQRAV GADTWSAVFI
AGCVMTGMGF APILVECGKS FGRLLPRNAI LQMAFTYFIC VGTYFVALGF PQWRLFDDGP
QVLGTAMLIL LPLLSGLFVS ISMYAPVSET TRQPSFDFEH FPKPLWKLVA SVSILAFAAA
VVQGWASTLV ALYNTVLLSS FVLLFQVPAA ASFVLLAVGS DTENVNFGRI FTMVMVVAGF
FVALAPVVGI NNHAFYQTVP FSMRIFDFVY CCLLFFVVYQ RRISAMIVVG IGVGFYQAFS
AAGWAVGAYL LPMISSSMVT QGIFVGLSFL TLFAAFMIFS EKEFKQLYEE RVEGQTPLSD
LLKKRIDSSV AIETHRGKFN IAIDFIADEF KLSRREKDVL RYLAMGYGSS KVADEMGISW
NTVRTHTRNL YGKLDVHSKD DLMALVDRYR DM
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